Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma03g01151 | ATGTCAATGGCACTCTCTCAGCTAAGCCACTCTCTGGAAAATGAACTGAAAGGTGCTGAAGACTCAGAATTTCCTCTGAAGGAAATTGGAAATGAAGGTCTCACAAAACGGATTCTCAGAAAAGGAGTCACTTGGCAAACTCCATTCTCTGGAGATGAAGTGGAAGGTGAAGTTATCAAAGGTTGGGATGAAGGAGTTGCCACCATGAAGAAAGGGGAGAGAGCAATCTTCAAAATACCACCTAACTTGGCATATGGGGAAGAAGGATCCCTTCCATTGATTCCTCCCAATGCAACTCTCATTTTTGACATTGAAATGCTGTCTTGGAGTAGCATAAGGGATTTGACTGGCGATGGAGGAGTCAAGAAAAAGATAATACGGGAGGGAGAAGGATGGGCAACTCCCAGAGAAGCTGATGAGGTTCTAGTGAAATATGAAGCAAGACTAGAGAATGGGATGCTTGTCTCCAAGTCTGATCAGGGTGTGGAGTTTAATGTAAGTGATGGCTATCTATGTCCTGCCATGAGCATAGCAGTAAAGACAATGAGAAAGGGCGAGGTGGCAGAACTAGCTATGAGATTCTGTTACGGACTCAGTCAAAATTCAAGTAGAATCACTGAGCTAGAAGGTGTTCTTCCACCAGATTCAAATTTAACTAGCATCAAGCTTGAGCTGGTATCATGGAAAATTGTTGCTGATGTCACAGGAGATAAGAAGATACTGAAAAAAATTAAGAATTTGGGTGAGGGGTTTGATCGCCCTAACGAGGGATCCCAAGTGAAAGTGATATATTTGTGTAAAGGGGAAGATGGTACGATTATTGAGAGCAAAGGATCAGAGGAAGAACCTTTTGAGTTCACAACTCAAGAAGAACAGGTACCTGAGGGTCTAGAAAGAGCAATAATGACAATGAAGAAAGGAGAGCAAGCTCTGGTAACTGTGGATGCTGAATATTTGTGCGACTATAATAATTCAAAGGGAAACACAGCTAATAATAAAGTCCTTTATTATGAAGTTGAGTTGGTTGATTTCGTTAAGGAAAAACCATTTTGGAAAATGGATACACAAGAGAAAATAGAAGCTTGTGAGAGGAAGAAGCATGATGGAAATCTGCTGTTCAAGGTTGAAAATTTCAGGCACGCATCCAAGAAATATGAAAAGGCTGTAAAATACATTGAGTTTGATCACTCATTCAGTGAAGATGAGAAGTGTCGTGCTAATACCTTACATTTATCCTGTAATTTGAACAATGCTGCCTGTAAACTTAAATTGGGGGAGTACATTGAAGCTTCAAGACTATGCACAAAGGTCCTAGAACAAGACCCTTTAAATATAAAGGCTCTTTACAGAAGATGCCAAGCATACTTGAAAACATCAGACTTGGAGAAAGCTGAGGCTGACATTAAAAGAGCTTTGATTATTGATCCAAATAACAGAGACATTAAACTTGAGTACAAAGAGCTGAAACTTAAGCAAAAGGAATACAGTAGACATGAAGCTGACATCTTCAGCACAATGCTTTCAAGAATGAACTAG | 1536 | 0.4004 | MSMALSQLSHSLENELKGAEDSEFPLKEIGNEGLTKRILRKGVTWQTPFSGDEVEGEVIKGWDEGVATMKKGERAIFKIPPNLAYGEEGSLPLIPPNATLIFDIEMLSWSSIRDLTGDGGVKKKIIREGEGWATPREADEVLVKYEARLENGMLVSKSDQGVEFNVSDGYLCPAMSIAVKTMRKGEVAELAMRFCYGLSQNSSRITELEGVLPPDSNLTSIKLELVSWKIVADVTGDKKILKKIKNLGEGFDRPNEGSQVKVIYLCKGEDGTIIESKGSEEEPFEFTTQEEQVPEGLERAIMTMKKGEQALVTVDAEYLCDYNNSKGNTANNKVLYYEVELVDFVKEKPFWKMDTQEKIEACERKKHDGNLLFKVENFRHASKKYEKAVKYIEFDHSFSEDEKCRANTLHLSCNLNNAACKLKLGEYIEASRLCTKVLEQDPLNIKALYRRCQAYLKTSDLEKAEADIKRALIIDPNNRDIKLEYKELKLKQKEYSRHEADIFSTMLSRMN | 511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma03g01151 | 511 | SUPERFAMILY | FKBP-like | 30 | 110 | - | - | |
| Gma03g01151 | 511 | SUPERFAMILY | FKBP-like | 115 | 200 | - | - | |
| Gma03g01151 | 511 | Gene3D | - | 55 | 112 | IPR046357 | GO:0003755 | |
| Gma03g01151 | 511 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 55 | 110 | IPR001179 | GO:0003755 | |
| Gma03g01151 | 511 | SUPERFAMILY | FKBP-like | 226 | 364 | - | - | |
| Gma03g01151 | 511 | Pfam | Tetratricopeptide repeat | 446 | 478 | IPR001440 | GO:0005515 | |
| Gma03g01151 | 511 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 257 | 345 | IPR001179 | GO:0003755 | |
| Gma03g01151 | 511 | Gene3D | Tetratricopeptide repeat domain | 348 | 505 | IPR011990 | GO:0005515 | |
| Gma03g01151 | 511 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 253 | 342 | IPR001179 | GO:0003755 | |
| Gma03g01151 | 511 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 134 | 202 | IPR001179 | GO:0003755 | |
| Gma03g01151 | 511 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 54 | 107 | IPR001179 | GO:0003755 | |
| Gma03g01151 | 511 | ProSiteProfiles | TPR repeat profile. | 445 | 478 | IPR019734 | GO:0005515 | |
| Gma03g01151 | 511 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 138 | 218 | IPR001179 | GO:0003755 | |
| Gma03g01151 | 511 | SUPERFAMILY | TPR-like | 352 | 506 | IPR011990 | GO:0005515 | |
| Gma03g01151 | 511 | Gene3D | - | 113 | 229 | IPR046357 | GO:0003755 | |
| Gma03g01151 | 511 | Gene3D | - | 230 | 347 | IPR046357 | GO:0003755 | |
| Gma03g01151 | 511 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 56 | 232 | - | - | |
| Gma03g01151 | 511 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 338 | 511 | - | - | |
| Gma03g01151 | 511 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 227 | 333 | - | - | |
| Gma03g01151 | 511 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 3 | 55 | - | - | |
| Gma03g01151 | 511 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 56 | 232 | - | - | |
| Gma03g01151 | 511 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 227 | 333 | - | - | |
| Gma03g01151 | 511 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 3 | 55 | - | - | |
| Gma03g01151 | 511 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 338 | 511 | - | - | |
| Gma03g01151 | 511 | SMART | tpr_5 | 445 | 478 | IPR019734 | GO:0005515 | |
| Gma03g01151 | 511 | SMART | tpr_5 | 411 | 444 | IPR019734 | GO:0005515 | |
| Gma03g01151 | 511 | SMART | tpr_5 | 362 | 395 | IPR019734 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma03g01151 | Gma-Chr3 | 36886218 | 36890926 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma03g01151 | 28 | 510 | Calmodulin-binding Proteins | AT5G48570 | 52.794 | 0.0 | 525 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma03g01151 | - | - | gmx:100785412 | 983.4 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma03g01151 | 03 | 36886218 | 36890926 | Gma03g01151 | 03 | 36886218 | 36890926 | ECH | |
| Gma19g01209 | 19 | 40823431 | 40827149 | Gma03g01151 | 03 | 36886218 | 36890926 | GST |