Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01149 ATGAAGCGCAAGATCGAGGAAGTGGAAGAAGAGAATCAGTTCTCATGTATGTTCTGCAGCAAAAAGTTCTCGAGTCCTCAAGCTCTAGGAGGACACCAAAATGCCCACAAAAAAGAGCGAAACCTCTTGATCAGTATGGATAAAGAAAAAGAGATGAATGCTCTTGGATTTAGCCCAGCTAATGTTCCCATGCAATCTAGGGCACCGTTTTATCCGTATTCATCACATTTATACATGTCAAACCTTCCCTTGCAAGCAAGGACACTCCCTTATAATGGTGCATACATGCACCCCATGACAGAACCTGGTTATTGCATTAACCAACGATTTTCCTTACCAACATCTCCATTGATTACTCGGAGTGAATCTACAAGACCCATTGTTGGTTCTTCTTCTAGTGTTGGTGCTGGTTTTGGTCAACTTCAGGGAAGTCCAAGTGAATCAAATAAAGAATCACGTCCAGAAGTTTTGGATTTGTCACTAAAACTTTGA 492 0.4146 MKRKIEEVEEENQFSCMFCSKKFSSPQALGGHQNAHKKERNLLISMDKEKEMNALGFSPANVPMQSRAPFYPYSSHLYMSNLPLQARTLPYNGAYMHPMTEPGYCINQRFSLPTSPLITRSESTRPIVGSSSSVGAGFGQLQGSPSESNKESRPEVLDLSLKL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01149 163 SUPERFAMILY beta-beta-alpha zinc fingers 10 41 IPR036236 -
Gma03g01149 163 PANTHER OS02G0182300 PROTEIN 10 163 - -
Gma03g01149 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 14 41 IPR013087 -
Gma03g01149 163 MobiDBLite consensus disorder prediction 123 163 - -
Gma03g01149 163 Gene3D Classic Zinc Finger 2 58 - -
Gma03g01149 163 PANTHER ZINC FINGER PROTEIN JAGGED 10 163 IPR045320 GO:0003700
Gma03g01149 163 ProSitePatterns Zinc finger C2H2 type domain signature. 16 36 IPR013087 -
Gma03g01149 163 MobiDBLite consensus disorder prediction 123 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01149 Gma-Chr3 36866972 36867463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01149 14 53 C2H2 Transcription Factor Family AT5G01860 62.500 6.95e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma03g01149 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01149 - - gmx:102667297 315.849