Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01134 ATGGACCAACAGCAGCGCCACGTCAGCAGCGGAACTACTAATCCCGTGCTCCGCTTCCCCACGGTGCGCCCCCTCCCCTTCGCGCGCCTCGTCGCCGCCTCCCGCCGCCGCCTCTTCCTCTCCGACTGCGCCGACCGCCGATCCGACGACGACGGAGATGGTGACGGCGACTCCGGCGAGTGCGCGTACTCGCGGGCGGTGCTCGTGCTCGACATGGTCTGGAACCTCGCCTTCGTCGTCGTCGCCGCCGGCGTCCTCCTCTCCACGCTCCGCGAGCGGCCGTCGACGCCGCTGAGGCTCTGGCTCTGCGGCTACGCCTTCGAGTGCGTCCTTCACATGGCCTTCGTCTACTTTGAGTTCCGAACCGGAATTCGCGACTCCTTCTCTCACACTGCCTATAGTATTGTGAAGAAGCTAGAGCCTATGAACACTCTGGCATCATCTGTTTGGTGGATCTTTGGATTTTATTGGATTGTTGTGGGTGACCAAGCACTTTTGGAAGATTCTCCACGTCTCTACTGGTTAACAGTGGTCTTTCTAGCCTTTGACGTATTTTTTATTATCTTTTGCATTGGGATGGCATGTATAGTTTTCTTTGCCCTCTTCTGCATCATCCCAATAATAGCACTAGCTTATGCTATGAGAATCAGAGAAGGTGCATCAGAAGAAGATATCTTGTCACTTCCTATGTATAGGTTTAGTCAGTCAAATTCATTGGTGATGGTTGATGACAACAAGAAGCAACTTATTAAAGGAAGAGTAGATTCATGCAATGGAAGCCATATGAGTGCGCTTTCTCTCCATCCAGATGATTCTGAATGCTGTATCTGCCTTTGTCCGTATGTTGAAGGAGCAGAACTGTATCGCCTTCCCTGTACGCACCATTTTCATTGCGAATGCATCGGCCGTTGGCTTCAGACAAAAGCAACTTGCCCGCTCTGCAAATTTAATATCCTTAGAGGTGATACATTGGTTTGA 978 0.5194 MDQQQRHVSSGTTNPVLRFPTVRPLPFARLVAASRRRLFLSDCADRRSDDDGDGDGDSGECAYSRAVLVLDMVWNLAFVVVAAGVLLSTLRERPSTPLRLWLCGYAFECVLHMAFVYFEFRTGIRDSFSHTAYSIVKKLEPMNTLASSVWWIFGFYWIVVGDQALLEDSPRLYWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIALAYAMRIREGASEEDILSLPMYRFSQSNSLVMVDDNKKQLIKGRVDSCNGSHMSALSLHPDDSECCICLCPYVEGAELYRLPCTHHFHCECIGRWLQTKATCPLCKFNILRGDTLV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01134 325 SUPERFAMILY RING/U-box 267 319 - -
Gma03g01134 325 ProSiteProfiles Zinc finger RING-type profile. 274 315 IPR001841 -
Gma03g01134 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 321 IPR013083 -
Gma03g01134 325 PANTHER RING-FINGER UBIQUITIN LIGASE 17 325 - -
Gma03g01134 325 Pfam Ring finger domain 273 315 IPR001841 -
Gma03g01134 325 PANTHER TARGET OF ERK KINASE MPK-1 17 325 - -
Gma03g01134 325 SMART ring_2 274 314 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01134 Gma-Chr3 36582359 36587821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01134 1 322 C3H Transcription Factor Family AT1G68070 41.739 4.23e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01134 - - gmx:100806994 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01134 03 36582359 36587821 Gma03g01134 03 36582359 36587821 ECH
Gma19g01197 19 40659564 40663457 Gma03g01134 03 36582359 36587821 GST