Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01114 ATGGACTTGTACGGTTCCTTTTCCACCCCTTCAGATTGCTTACACATCGATGATTTTCTAGATTTCTCCAACATCACCACCACCACCACCGACACCCACCACCACTTTCCTCCGCCGCAAAACTCTCCATCAATCTCCCACGATCCCAATTTCTTCCTCAATTTCCCTTCCGTTCCGAGCGACGAAGCAGTGGAGCTGGAGTGGCTCTCCCAGTTCGTGAACGACGAGGCGACGTCGTTTCACAACATCCCACCACCCGCATCCATTGGATCCCACACGACGCCGTTTCTTTCCAACAATAACAGGAACGATAATAATAACGAATATCCCAAATCATCATCATCTTCACCGGTGTTGGCGGGAAAATCGAGAGCAAGAAGGGAAGGGTCGGTGACCGGCGACGGCGTGCGGCGCTGCAGCCACTGTGCGACGGATAAGACCCCGCAGTGGCGCACGGGACCGTTGGGGCCGAAGACGCTCTGCAACGCGTGCGGCGTGCGGTTCAAGTCGGGTCGGCTCGTACCCGAATACCGACCCGCCGCGAGCCCTACGTTCGTGATGACTCAGCACTCGAACTCGCACCGCAAGGTTATGGAGCTCCGTCGCCAGAAGGAGCTGCTCCGCCACCAGCAGCAAGAACAATGCTACCGTCACACTCACCACGACTTCAAAGTCTGCTGA 681 0.5639 MDLYGSFSTPSDCLHIDDFLDFSNITTTTTDTHHHFPPPQNSPSISHDPNFFLNFPSVPSDEAVELEWLSQFVNDEATSFHNIPPPASIGSHTTPFLSNNNRNDNNNEYPKSSSSSPVLAGKSRARREGSVTGDGVRRCSHCATDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVMTQHSNSHRKVMELRRQKELLRHQQQEQCYRHTHHDFKVC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01114 226 Gene3D - 133 214 IPR013088 GO:0006355|GO:0008270
Gma03g01114 226 MobiDBLite consensus disorder prediction 83 138 - -
Gma03g01114 226 ProSiteProfiles GATA-type zinc finger domain profile. 137 169 IPR000679 GO:0006355|GO:0043565
Gma03g01114 226 PANTHER GATA TRANSCRIPTION FACTOR 2 13 215 - -
Gma03g01114 226 SMART GATA_3 133 183 IPR000679 GO:0006355|GO:0043565
Gma03g01114 226 CDD ZnF_GATA 138 185 IPR000679 GO:0006355|GO:0043565
Gma03g01114 226 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 137 197 - -
Gma03g01114 226 Pfam GATA zinc finger 139 172 IPR000679 GO:0006355|GO:0043565
Gma03g01114 226 MobiDBLite consensus disorder prediction 84 120 - -
Gma03g01114 226 ProSitePatterns GATA-type zinc finger domain. 139 164 IPR000679 GO:0006355|GO:0043565
Gma03g01114 226 PANTHER GATA TRANSCRIPTION FACTOR 13 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01114 Gma-Chr3 36221542 36222869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01114 36 214 C2C2-Gata Transcription Factor Family AT2G45050 50.233 1.41e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma03g01114 GATA 7.6e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01114 - - gmx:100803262 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01114 03 36221542 36222869 Gma03g01114 03 36221542 36222869 ECH