Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01100 ATGAGAAAACGTATCAATATGGAAAGTGATGCTGACTTCAATTCCTTTGCCACTTCAACTCCTTCAATCTTCTTTGACACCAACACTTCTAGCACAtcctcctcctcctcctcctcctcctcATCATCATCAACATCTCCAACCTCAAACAAAGATTCATGCACCAAAGAACACACCAAAACCCCTCAAAATGACTCAACCATTTCTCAAACCTCATTAGAAAATAAAGAGGACTCAAAAGAGTGCAAGAAGAGGCAGAGAGACAATAGCAACCAGAATCACCACCCTACTTATAGGGGTGTAAGGATGAGGAATTGGGGCAAATGGGTGTCCGAAATTCGCGAGCCAAGAAAGAAATCAAGAATATGGCTCGGAACATACCCTACAGCAGAAATGGCAGCTAGAGCACATGATGTGGCTGCCTTAGCCATCAAGGGCCATTCAGCATACCTCAATTTCCCTGAATTGGCTCAAGAACTTCCAAGGCCTGCTAGCACATCTCCTAAGGACATTCAAGCTGCAGCATCAAAAGCAGCAAACACTGCCTTTGAGGTGGTTAAGCATTGTCAAATAACTGAAGAACAAGAACAAGAACAAAACCAAGCAGAACAAGAAACATCTTCAACTCTCTCAATGGACAACACTCAAGAGCCTTCAAGTTCTCACTCTACCAATGATGATGACACTTTGTTTGATCTTCCAGATCTTTTCCCTGATGGAAACAATGGACTTTGCTCTTTTTCTTCTTGGCATTTGTGTGCAGTTGATAGTGGCTTTAGGCTTGAGGAATCATTTTTTTGGGAGAACTATTAG 813 0.4059 MRKRINMESDADFNSFATSTPSIFFDTNTSSTSSSSSSSSSSSSTSPTSNKDSCTKEHTKTPQNDSTISQTSLENKEDSKECKKRQRDNSNQNHHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPASTSPKDIQAAASKAANTAFEVVKHCQITEEQEQEQNQAEQETSSTLSMDNTQEPSSSHSTNDDDTLFDLPDLFPDGNNGLCSFSSWHLCAVDSGFRLEESFFWENY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01100 270 Coils Coil 73 93 - -
Gma03g01100 270 MobiDBLite consensus disorder prediction 194 228 - -
Gma03g01100 270 MobiDBLite consensus disorder prediction 195 227 - -
Gma03g01100 270 CDD AP2 98 156 IPR001471 GO:0003700|GO:0006355
Gma03g01100 270 Gene3D AP2/ERF domain 97 155 IPR036955 GO:0003700|GO:0006355
Gma03g01100 270 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 270 - -
Gma03g01100 270 MobiDBLite consensus disorder prediction 74 92 - -
Gma03g01100 270 PANTHER ETHYLENE RESPONSE FACTOR 7 270 - -
Gma03g01100 270 SMART rav1_2 97 160 IPR001471 GO:0003700|GO:0006355
Gma03g01100 270 MobiDBLite consensus disorder prediction 1 100 - -
Gma03g01100 270 MobiDBLite consensus disorder prediction 11 52 - -
Gma03g01100 270 SUPERFAMILY DNA-binding domain 97 155 IPR016177 GO:0003677
Gma03g01100 270 ProSiteProfiles AP2/ERF domain profile. 97 154 IPR001471 GO:0003700|GO:0006355
Gma03g01100 270 Pfam AP2 domain 96 147 IPR001471 GO:0003700|GO:0006355
Gma03g01100 270 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Gma03g01100 270 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01100 Gma-Chr3 35939208 35940020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01100 85 266 AP2-EREBP Transcription Factor Family AT2G44940 54.369 1.80e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma03g01100 AP2 3.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01100 - - gmx:100801129 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01100 03 35939208 35940020 Gma03g01100 03 35939208 35940020 ECH
Gma03g01100 03 35939208 35940020 Gma07g00999 07 11487695 11488833 GST