Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01068 ATGCTGAATTCAGGCACTGAGAGGACACTTTTGACACTAGCTCTGAGAGTTGAAGTTTGGCAGCTTCAAGTCCTACTACTCCTAAGCTCTGTCTACCTAGTGTTTCCTGAGCCTTCTCCAACACTGCCTGAAGGTATTTTCCTTGAGCCTCAATACGTAGCTGCAGGAGTCTTTGCACCTGAATATGGGGGTTCTAATTGTGACTCAGCTCAAAAGTGCATATTGTTTTTGCTGGGAAGAGAGCAGAAGATTAAGCAGCTTCAGAAAATGGGAGAGGGGTCTGTGGAACTTGAGGCTATTGTAAAGGAAGCTGTTGATCTGGAGAACATTCCTATTGAGGAGGTTTTTGATAATCTCAAATGCACAAAAGAAGGTTTAAGCTCCGAGCAAGTACAACAGAGGCTTGACTTGTTTGGATACAATAAGCTTGAAGAAAAAAAGGAAAGTAAGATACTGAAGTTTTTGGGCTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCTGCTGCTATCATGGCCATAGGCATGGCACATGGAGGGGGTGAAGGTGGAGATTATCAAGATTTTGCTGGCATAGTTCTTTTGCTACTTATAAACTCCACCATCAGTTTCATAGAAGAAAACAATGCTGGCAATGCAGCTGCTGCCCTTATGGCCAGATTAGCCCCCAAAGCAAAGGTACTTCGTGATGGAAAATGGAGTGAAGAAGATGCTTCAGTGTTGGTTCCCGGAGACATAATTAGCATCAAGCTTGGTGACATCATTCCTGCTGATGCACGTCTCCTTGAAGGCGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTCTCAAAACATCCTGGAGAAGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAGGCAGTAGTTATTGCAACTGGAGTTCACACCTTTTTTGGGAAGGCAGCTCATCTTGTGGAAAACACAACACATGTTGGACATTTCCAAAAGGTTCTAACATCTATTGGGAATTTCTGCATCTGTTCAATTGCTGTTGGTATGATTTTGGAAATCATTGTGATATATGGAATCCATAAAAAGAAATACCGAAATGGTATTGATAACCTCCTTGTGCTATTGATTGGTGGCATCCCTATTGCAATGCCAACTGTCCTTTCTGTTACTATGGCTATTGGTTCACACAAGTTGGCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAAATGGCTGGAATGGACGTGTTATGTAGTGACAAAACAGGCACATTAACTCTTAACAAGCTTTCAGTGGACAAGAATATCATTGAGGTTTTTGCTAAAGGGGTTGATAGTGATATGGTTGTACTTATGGCTGCAAGAGCATCAAGGCTAGAGAACCAAGACGCAATTGATTGTGCTATAGTTTCGATGTTAGCAGACCCAAAGGAGGCACGAACTGGAATAAAAGAAGTTCATTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATACCTTGATGCTGCCGGTAAAATGCACAGAGTTAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCACATAACAAACCAGAAATCCAACAGAGGGTTCATGCAATTATTGACAAGTTTGCAGAACGTGGACTTCGTTCTCTTGCAGTCGCCCGTCAGGAAGTACCTGAGGGAACTAAAGACAGTCCAGGAGGACCATGGGAGTTTGTTGGCCTGCTCCCTCTTTTCGATCCTCCTCGCCATGATAGTGCAGAAACAATTAGAAGAGCTCTTGATCTTGGCGTGAGTGTAAAAATGATCACTGGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGGCGTCTAGGGATGGGAACTAACATGTATCCTTCTTCATCACTGCTTGGTGAAAATAAAGATGGATTGGGTGCTGTCGCCGTTGATGATCTCATTGAGAATGCTGATGGTTTTGCTGGAGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGTGGGATGACTGGTGATGGGGTGAATGATGCACCTGCCCTGAAGATAGCAGACATAGGTATTGCTGTAGCAGATGCTACAGATGCAGCCAGAAGTGCTTCTGACATAGTCCTAACCGAACCCGGGTTGAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCGATTTTCCAGAGAATGAAAAACTACACAATATATGCTATATCTATCACTATTCGTATTGTGCTTGGTTTCATGTTACTGAACAGCTTTTGGAAATTCGACTTTCCTCCCTTTATGGTTCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGACAGGGTTAAGCCTTCTCCACTTCCTGATAGTTGGAAGCTTAGTGAAATCTTTACAACTGGGATTGTTCTTGGCAGCTATCTGGCTCTAATGACTGTGATCTTCTTCTATATAGTTGTTGAAACAAACTTCTTTCCTGACCATTTTGGTGTGAAACACTTTCACTACAATCCAGATGCTTCTATCAAAGATCCAACCAAAAGAATGTTGGGATCTGCTGTCTATCTTCAAGTCAGTACAATTAGTCAAGCCTTAATTTTCGTGACACGCTCAAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTCACTGCCTTCATCATTGCTCAAGCGATTGCAACTGTTGTATCTGCCACTCTCAGTTGGAGACTTGCTGGAATCAAAAGTATTGGTTGGGGCTGGACAGGAGTCATATGGTTATACAATATTATAACGTATCTATTTCTAGATCCTTTAAAGTTTGCTGTTCGTTACGCACTCAGTGGAAGGGCTTGGAATACAGTGATAAACCAAAGGACTGCATTCACCAACAAAAATGACTTTGGTAAAGAAGCTCGTGAGGCTGCATGGGCAACCGAGCAGAGAACCTTACATGGCCTCCAATCTGCTGAGTCAAAAGGGTTTACAGACAAGCACACCTTCAGAGAAATTAATACATTGGCAGAAGAGGCTAGGAGGCGCGCAGAGATAGCAAGGCTGAGAGAGCTTCACACTCTCAAAGGTAGAGTGGAATCATTTGCCAAGCTAAGGGGTCTGGACATTGATGCCATGAACGGACACTACACTGTCTAA 3150 0.4295 MLNSGTERTLLTLALRVEVWQLQVLLLLSSVYLVFPEPSPTLPEGIFLEPQYVAAGVFAPEYGGSNCDSAQKCILFLLGREQKIKQLQKMGEGSVELEAIVKEAVDLENIPIEEVFDNLKCTKEGLSSEQVQQRLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIGMAHGGGEGGDYQDFAGIVLLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLTSIGNFCICSIAVGMILEIIVIYGIHKKKYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEVFAKGVDSDMVVLMAARASRLENQDAIDCAIVSMLADPKEARTGIKEVHFLPFNPTDKRTALTYLDAAGKMHRVSKGAPEQILNLAHNKPEIQQRVHAIIDKFAERGLRSLAVARQEVPEGTKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDGLGAVAVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFTTGIVLGSYLALMTVIFFYIVVETNFFPDHFGVKHFHYNPDASIKDPTKRMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVVSATLSWRLAGIKSIGWGWTGVIWLYNIITYLFLDPLKFAVRYALSGRAWNTVINQRTAFTNKNDFGKEAREAAWATEQRTLHGLQSAESKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYTV 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01068 1049 SUPERFAMILY HAD-like 416 725 IPR036412 -
Gma03g01068 1049 Gene3D - 185 913 - -
Gma03g01068 1049 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 192 627 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g01068 1049 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 653 755 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g01068 1049 Gene3D - 417 715 IPR023214 -
Gma03g01068 1049 Gene3D - 223 307 - -
Gma03g01068 1049 SUPERFAMILY Calcium ATPase, transduction domain A 223 320 IPR008250 -
Gma03g01068 1049 Pfam haloacid dehalogenase-like hydrolase 416 692 - -
Gma03g01068 1049 PANTHER PLASMA MEMBRANE ATPASE 92 1029 - -
Gma03g01068 1049 Gene3D - 998 1049 - -
Gma03g01068 1049 Pfam Cation transporter/ATPase, N-terminus 109 172 IPR004014 -
Gma03g01068 1049 SFLD p-type atpase 402 729 IPR044492 -
Gma03g01068 1049 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 125 904 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma03g01068 1049 CDD P-type_ATPase_H 125 940 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma03g01068 1049 PRINTS H+-transporting ATPase (proton pump) signature 678 694 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g01068 1049 PRINTS H+-transporting ATPase (proton pump) signature 536 554 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g01068 1049 PRINTS H+-transporting ATPase (proton pump) signature 709 734 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g01068 1049 PRINTS H+-transporting ATPase (proton pump) signature 650 666 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g01068 1049 PRINTS H+-transporting ATPase (proton pump) signature 859 880 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma03g01068 1049 PANTHER CALCIUM-TRANSPORTING ATPASE 92 1029 - -
Gma03g01068 1049 SUPERFAMILY Calcium ATPase, transmembrane domain M 106 946 IPR023298 -
Gma03g01068 1049 Gene3D - 432 579 IPR023299 GO:0000166
Gma03g01068 1049 ProSitePatterns E1-E2 ATPases phosphorylation site. 422 428 IPR018303 -
Gma03g01068 1049 Pfam E1-E2 ATPase 221 400 - -
Gma03g01068 1049 SFLD Haloacid Dehalogenase 402 729 - -
Gma03g01068 1049 SMART Cation_ATPase_N_a_2 106 178 IPR004014 -
Gma03g01068 1049 PRINTS P-type cation-transporting ATPase superfamily signature 270 284 - -
Gma03g01068 1049 PRINTS P-type cation-transporting ATPase superfamily signature 701 713 - -
Gma03g01068 1049 PRINTS P-type cation-transporting ATPase superfamily signature 678 697 - -
Gma03g01068 1049 PRINTS P-type cation-transporting ATPase superfamily signature 596 606 - -
Gma03g01068 1049 PRINTS P-type cation-transporting ATPase superfamily signature 574 585 - -
Gma03g01068 1049 PRINTS P-type cation-transporting ATPase superfamily signature 420 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01068 Gma-Chr3 35406305 35420052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01068 90 1049 Primary Pumps ATPases AT5G62670 78.772 0.0 1528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01068 K01535 - gmx:100794938 1811.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01068 03 35406305 35420052 Gma03g01068 03 35406305 35420052 ECH
Gma03g01068 03 35406305 35420052 Gma07g01032 07 12134524 12142143 GST