Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01059 ATGAACAATTTCAACACCACTCTTGAATCCGATGATTTCTCTCTTCTAGAATCCATTCAACGTTACCTCCTTGATGATAACGAAGATTTCAACGCTCTAACGGAGGTTTTAGCAACACCCAATAATGTCGATGCCGTTAACTCTCCATTATCTTTGTCAGAACATGCAACAACGACTGCCACGGCGGCGCGTGGGGCTTCAGTTTCGGTGGCGCGTGCTAGCCACGCCCGTAGCCAAAATTATAAGGGGGTGAGGCGTAGGCCTTGGGGCAAGTTTGCAGCTGAGATAAGGGACCCGAATAAGAACGTGAGAGTGTGGCTTGGGACTTACGAGTCGGCTGAGGATGCGGCTCTGGCTTATGATCGAGCCGCTTTTGAAATGCGTGGCTCGAAAGCTAAGCTCAATTTTCCTCATTTAATTGGGTGCAATGATGCCGAGCCGAGCCAAAGACAGTAA 456 0.4912 MNNFNTTLESDDFSLLESIQRYLLDDNEDFNALTEVLATPNNVDAVNSPLSLSEHATTTATAARGASVSVARASHARSQNYKGVRRRPWGKFAAEIRDPNKNVRVWLGTYESAEDAALAYDRAAFEMRGSKAKLNFPHLIGCNDAEPSQRQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01059 151 CDD AP2 79 139 IPR001471 GO:0003700|GO:0006355
Gma03g01059 151 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Gma03g01059 151 PRINTS Ethylene responsive element binding protein signature 119 139 IPR001471 GO:0003700|GO:0006355
Gma03g01059 151 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Gma03g01059 151 PANTHER DNA-BINDING DOMAIN 51 139 IPR044808 GO:0003700|GO:0009873
Gma03g01059 151 Pfam AP2 domain 80 129 IPR001471 GO:0003700|GO:0006355
Gma03g01059 151 Gene3D AP2/ERF domain 79 138 IPR036955 GO:0003700|GO:0006355
Gma03g01059 151 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Gma03g01059 151 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 51 139 - -
Gma03g01059 151 SUPERFAMILY DNA-binding domain 80 138 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01059 Gma-Chr3 35300163 35300907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01059 24 147 AP2-EREBP Transcription Factor Family AT2G44840 54.962 1.42e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma03g01059 AP2 8.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01059 K09286 - gmx:102661516 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01059 03 35300163 35300907 Gma07g01034 07 12163225 12163966 GST