Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01056 atgggagaaaaacaagatgagcctactaaaatcaactgcgacaacaaatcagcaattacaatgGAGCATGCATCTGATAGAATTGTTAGAGATATGGATTTACAGCTTTTGCAGGCACATGTGTCTGTGCAGCTGTACTCACCATTTCGACCAGCTGTTGACATAGCAGAAGTATTTCTTTGGATGATGGCAGTTCTTACAATATTGTGTGCATCATATTGGTCAGCTAGGACAACCCGAGAAGCAGTTATTGAACAGGATAAGCTACTAAAGGATGCTTTAGATGAAATCCCAAACACTAAATATGCTAGTGTTAGTGGAGTTGTAAACATGAATGTGAAAGCTGCAGTGCTTTTTGTTGTATTTGCTTTGTGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCATGGTTCATTGACGTTTTGGTTGTTCTCTTCTGTATTGGTGGTATTGAGGGCTTGCAAACATGCTTGGTTGCTCTTTTGTCCAGGTGGTTCAAGCATGCTGAAAAGTCATACATCAAAGATAGTCACTTCTTGGATGGACTTAATAAGTCCAGATTATTTGAGTATTTGAGGCTTACCACTCTTGGAGTCATTGGTGCCTCTAATAGAACTCCTGAATTCCTTAAAATGAATCCCATTGGAAAGGTTCCTGTCTTGGAAACGCCCGATGGTCCAGTCTTTGAGAGCAATGCCATTGCTCGTTACGTTGCTCGACTCAAGGGTGACAACGCTTTGTTCTCATCTTCTGCCATTGATAATCAAGCTTCTTCTTCCGCGCTTTCGTTCTTCTCCTTCCAAAAAGGTTCGTCTTCTTCCTTCGTCTTCTTTCGTTCTTCCTCCGCGCCCTTCATTTGCTTATCGATTTCAAATTTGGTTCCCTTCTTCTCCTCCACAGCTATTGGCATCCTCCATTGGCTAGCTTTGTTCGTTTCTTCTACCATTCAGCGGAAGAAGGAGTTCTTCCGCGGGCTCCTGCGAAAGAAAGGTGGAAAGGTTCTTCCGGGTTTCGGTGGAAGAAGGTTCAGCAGATCTGCAACATCAAAGCCTAGATATGTTTTGGCCAACAACTTAGATCTCAACATATTTGAGAAGCAACCATCTCTTGATCCCTTGATAATTTTGTCACAAGATTTTGGAAGTAAATCCTATTGGAGAAACCATCTCTTGAAGTGA 1179 0.3986 MGEKQDEPTKINCDNKSAITMEHASDRIVRDMDLQLLQAHVSVQLYSPFRPAVDIAEVFLWMMAVLTILCASYWSARTTREAVIEQDKLLKDALDEIPNTKYASVSGVVNMNVKAAVLFVVFALCFLFMLYKLMSSWFIDVLVVLFCIGGIEGLQTCLVALLSRWFKHAEKSYIKDSHFLDGLNKSRLFEYLRLTTLGVIGASNRTPEFLKMNPIGKVPVLETPDGPVFESNAIARYVARLKGDNALFSSSAIDNQASSSALSFFSFQKGSSSSFVFFRSSSAPFICLSISNLVPFFSSTAIGILHWLALFVSSTIQRKKEFFRGLLRKKGGKVLPGFGGRRFSRSATSKPRYVLANNLDLNIFEKQPSLDPLIILSQDFGSKSYWRNHLLK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01056 392 Pfam Signal peptide peptidase 108 190 IPR007369 GO:0004190|GO:0016021
Gma03g01056 392 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 189 246 IPR004045 -
Gma03g01056 392 Gene3D - 247 256 - -
Gma03g01056 392 PANTHER SIGNAL PEPTIDE PEPTIDASE 35 179 IPR007369 GO:0004190|GO:0016021
Gma03g01056 392 CDD GST_N_EF1Bgamma 201 241 - -
Gma03g01056 392 Gene3D Glutaredoxin 198 246 - -
Gma03g01056 392 Pfam Glutathione S-transferase, N-terminal domain 204 240 IPR004045 -
Gma03g01056 392 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 35 179 - -
Gma03g01056 392 SUPERFAMILY Thioredoxin-like 199 247 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01056 Gma-Chr3 35263655 35273493 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01056 200 268 Eukaryotic Initiation Factors Gene Family AT1G09640 62.319 2.54e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01056 K09597 - gmx:100815915 247.284