Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01051 ATGCAAGGAGGACTACGACAAAGTATGCACCACCTCTCCGAGCACTCCAACGTCGTTCGCATCCACGACACCTACGAGGACACCGCCTTCATGGAGGCTTGCCACTGGCTTGGGGTCATGCATAGGGACCTCAAGCCTAAGAACTTTCTCTTTGATACTGTTGAGGAGGGTGCTAAGGTCAAAACTACTGATTTTGGGCTCTCCGTGTTTTATAAGCCAGGTTTGGTTGCTCTCTCGTTAGATTTGGTTTTTGTGGAGGATGCCGAGGGGAGGGCTTGGTCGTGGGTTTTGGTGGAGGTGGGGATTCCGATGATGTCTTTGAGTTTTCCTTGGCGGAGGAGCTCGCCGATGCAGTCGACGACATGCTTGGCAGTGGAGCTGGTGTTGAGGACCATGCCGGACTTGACATACTCAACAACCTTGTAG 426 0.5258 MQGGLRQSMHHLSEHSNVVRIHDTYEDTAFMEACHWLGVMHRDLKPKNFLFDTVEEGAKVKTTDFGLSVFYKPGLVALSLDLVFVEDAEGRAWSWVLVEVGIPMMSLSFPWRRSSPMQSTTCLAVELVLRTMPDLTYSTTL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01051 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01051 141 Pfam Protein kinase domain 31 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01051 141 SUPERFAMILY Protein kinase-like (PK-like) 8 74 IPR011009 -
Gma03g01051 141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Gma03g01051 141 PANTHER CDPK-RELATED KINASE 31 76 - -
Gma03g01051 141 PANTHER CDPK-RELATED KINASE 7 31 - -
Gma03g01051 141 Gene3D Transferase(Phosphotransferase) domain 1 21 90 - -
Gma03g01051 141 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 76 - -
Gma03g01051 141 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01051 Gma-Chr3 35144774 35145199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01051 7 74 EF-hand Containing Proteins AT1G35670 49.057 6.20e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma03g01051 Pkinase 1.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01051 K13412 - gmx:100790443 108.227