Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01042 ATGGAGAGGGTTGCAGAGCCAAAGGTACTCCCTCGAACCTTGCCTATCCTGGTTGAGGTATCGAACTCACGCACAGCTGCTGCAAGAGAGTCCGGTCAGAGACTAAATCGCCAGGAAGTTTCGGGTGTCGGTGGGATTTCACTGAGAGAAGTGAATCAATTGTCCAGAACAAGGGATGTGCATGTTCCTATTACACATCTGGCCTCCATCAGAGAAGTGGCTCAGTTGACGAATGCACGGATATATTTGGTGCAAGAAGATACAGGATTTGATGCTCGATCCTCTGAAGAATCCCTCACCTTTGAGCCTACTATGACATGGAAAGGAAATGGCTCTTCACCAGAAGAAGCTGAAGAATTTGTGCCCGATATTGAGACATTGAAGGGGAGCAGTGATTCATTTGAGGATGGTGGTTCGAGTTTATTTGCTGGTGCTAGTCATCCCCCTGAACCTGTTGATACAGATCTCATGAGAACGGTTTTTGTACCGATAGGTCAAAACAAATCCGAGGCTGGATGCTTAATTAAGAACTTGCCCACAAAGGGCCCTTTCCTGGAGGATCTCTCGATTCGTGTTCCTGCAAAGAAACCAAGTCCAGCTGTTCTTTCCCCTGAAGAAAGTCTGGTTGAAGAACTAAATGGCATAGGGAACTTATCATTTTTAGGTCCTCGAACATTGCAGAGTACTGAGAACTCTCTCCTCCCTCCAGATGCTGAGGAAAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTCAGTCCACTTAGTAGTATTGATAGTATCGGTGTTGTCACTGCGATGAGCATTGTTAATAGTTGTGCTAGTACGTATCGGAGTGATGCAATGACCAGTGATGGCATGCTTAGTTTAGACAGGAACTGTGACAGTAATAAAGGTAGTGTAAGGGGGGATTCACTAGAGAGTGCTAAAACTAGTGTTAGTCGGCCAAGTGATAGCAGTGGCCTCAGCGATGACAGCAACTGGAGCAACATTACTGGTAGTGCCAATAAACCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGGTTACGGGATGGGATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTAGGATGCGGCGATATTGGAAGTGTCTATCTCTCAGAGCTGAGTGGAACTCGGTGTTATTTTGCAATGAAAGTTATGGATAAGGCATCCCTAGCAAGCAGAAAGAAGCTGACTAGAGTACAGACAGAGAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTACCGACTTTGTATACACATTTTGAGACTGACCGATTCTCGTGTTTGGTAATGGAATATTGTCCAGGTGGTGATCTGCACACTTTAAGGCAGCGGCAACCTGGGAAACATTTTTCAGAATATGCTGCACGCTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTATAGAGACCTCAAACCTGAAAATGTGTTGGTCCGAGATGATGGTCACATAATGCTATCAGATTTTGATCTTTCCCTCAGATGTGCTGTGTCACCTACTCTTATTAGAACTTCCTATGATGGTGACCCTTCAAAACGGGCAGGTGGTGCATTCTGTGTTCAACCTGCATGTATTGAGCCATCATCAATGTGCATCCAACCTGCATGTTTTATTCCCCGGTTATTTCCTCAGAAAAACAAGAAGTCACGGAAGCCAAGAGCTGATCCTGGGTTGCCGTCCAGCACACTTCCAGAGCTTGTTGCTGAGCCTACTCAAGCTCGATCTATGTCCTTTGTTGGCACTCATGAGTACCTTGCCCCAGAAATTATCAAGGGTGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTCGGAATTTTCTTGCATGAGCTATTATATGGTAAGACCCCTTTCAAAGGGTCAGGAAATCGCGCTACACTTTTCAATGTAGTTGGTCAGCAACTCAGGTTTCCCGAATCACCGGCGACCAGTTATGCCAGCAGGGATCTGATCCGTGGGTTGCTCGTGAAGGAGCCACAGCATCGTCTTGGGGTTAAAAGGGGAGCAACTGAGATCAAGCAGCATCCCTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGCAGCACACCGCCAGAAGTGCCGAGACCGATGGAAAATGAAGTACCAGCAGGGAAGGTTGTGGGACCAGTTGATCCTGTTGGGGTTGGCAGCACTAGTAAGAGGATAGCAGGTACTGACAACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2292 0.4642 MERVAEPKVLPRTLPILVEVSNSRTAAARESGQRLNRQEVSGVGGISLREVNQLSRTRDVHVPITHLASIREVAQLTNARIYLVQEDTGFDARSSEESLTFEPTMTWKGNGSSPEEAEEFVPDIETLKGSSDSFEDGGSSLFAGASHPPEPVDTDLMRTVFVPIGQNKSEAGCLIKNLPTKGPFLEDLSIRVPAKKPSPAVLSPEESLVEELNGIGNLSFLGPRTLQSTENSLLPPDAEEKECVWDASLPPSGNVSPLSSIDSIGVVTAMSIVNSCASTYRSDAMTSDGMLSLDRNCDSNKGSVRGDSLESAKTSVSRPSDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRVQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDGDPSKRAGGAFCVQPACIEPSSMCIQPACFIPRLFPQKNKKSRKPRADPGLPSSTLPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMENEVPAGKVVGPVDPVGVGSTSKRIAGTDNMKSGGKYLDFEFF 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01042 763 SUPERFAMILY Protein kinase-like (PK-like) 348 722 IPR011009 -
Gma03g01042 763 ProSiteProfiles Protein kinase domain profile. 367 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01042 763 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 77 763 - -
Gma03g01042 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Gma03g01042 763 Gene3D Transferase(Phosphotransferase) domain 1 595 717 - -
Gma03g01042 763 CDD STKc_phototropin_like 365 719 - -
Gma03g01042 763 SMART serkin_6 367 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01042 763 Pfam Protein kinase domain 597 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01042 763 Pfam Protein kinase domain 368 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01042 763 MobiDBLite consensus disorder prediction 291 344 - -
Gma03g01042 763 Gene3D Phosphorylase Kinase; domain 1 365 450 - -
Gma03g01042 763 PANTHER FLIPPASE KINASE 1-RELATED 77 763 - -
Gma03g01042 763 MobiDBLite consensus disorder prediction 292 340 - -
Gma03g01042 763 Gene3D Transferase(Phosphotransferase) domain 1 451 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01042 Gma-Chr3 34935661 34940035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01042 1 763 AGC Kinase Gene Family AT2G44830 66.158 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma03g01042 Pkinase 8.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01042 - - gmx:100792314 1507.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01042 03 34935661 34940035 Gma03g01042 03 34935661 34940035 ECH
Gma03g01042 03 34935661 34940035 Gma07g01041 07 12303163 12307463 GST
Gma03g01042 03 34935661 34940035 Gma18g02309 18 56903496 56907078 PCT
Gma03g01042 03 34935661 34940035 Gma09g02225 09 47790676 47795534 PCT