Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01028 ATGGCAGAGTCCGAATTCGAACCAAACCGAGTCCATGACCTCGAAGAGAAATCGTGGCACCTCCTCGCGCTCCTCTTCCGAATCGGCCACGCCGTTTACCCGCAACGCCTCGCCGCGCAGTGCCGTTTGTTCGCCGCCTCGCCTGACTTCGTCTGCTACGTCAGCACTCTCCCCGGCTCGCCGCTCTCCGTCACCGACAACGGGCTCGTCACGCCCTCCGTCAGCGCCGTCTTCGCCCTCGGAAGCTTCTTCTCCCTCCGCTTCTCGCCGCCGCAGACGCACCGTTTCAGGAAACGCAAGTTGCTTTTCGATTCCGCCGAAGCAGATGGAAGAGAGCGCAAGAGGTTAGCGATTCGTCATGGACTTCGAGAATTTTCGTTCCAGAGTTTTGCTGATGCTGCAGAGGCTCTGATGAGAAGCAATTTCCCTGTAATAAAATTTGAATCACAGAATATAGGTAGTGGAAATTTTGTATTCCTCTTGCGTATTGATAAAAATGAAGAGTGTTCTGGTTGTCCAATGTCAAATTTTGAACATCGGGGAGCCAATAATGATGCCAGCACAACCATGTCTAATGGAGAGGTTTCTAAATCTATTATCGAAGTGCTGACCAAAAAAATATCCATTATCAAAACAAGTTACTTGAACTGTCCGAAGCTAGTGGACAAAAATAGATTCATGGAATGCAATCTCTTTGTTGTGGATCCCCCATGCAAAGAGGGAATAGTTAACAACCTTGGAATTGGGAAGAAAATAGATTATTTTGACACATTTACGCATGACTGTGCTGAACAAAACAGTATTCATCATGTGGATGAAGATGGTATTGGTAAAAGTAATACTTGCAAAGATCAACCAAGAGAACCAAATGAAGATGATGAGGTGGAAAGTGGTTCAAAGAAAGGGCTGATTGATTCTGGCACAAATAGAGTCAAGGAAGATGTTGCTCAGAGGGTCAATGCTGCACTATGTGGAGAAGCATTGACTAATGGTTTGGAACAAAAGAACCATGTCCATGCAATGAATTTGGAAAAGGAGAGTGAGAGAAACACAGGGACTAAGTCTACTAATAAAATATCAAATTCCTCTTCAACTCCTAAGCGACCTTTGAAATCTTCTAGCATATTAAAGGGAGGACAGAAGAATGATCTCCACCCCAAGTCACAAATTCTTAAAGAGTCATTAGTCAGTAATAAATTTGGTAATGTTCCAAAAAATGTTGATCAACGTAAAAATGAACAGAATCTTACAGCAAGGAAGCAAAATCATAAAGAGAACATGGCTGGAAATATTGCCACTACTACTAAGGTGGAGAAAAGAGCATATCCATCATTTGAAGCTTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACCGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTTGCAATAAAATGTCCTCATACTAATGCTCATAAAAACCATGTAAATAATGAACGGAGTATGCTCGAGCGTTTTGGTGGTAAAAACTATATAATAAGGTATGAGGGCTCTTTTAAAAATGGCAACAGCGACTGCTTTGTTTTAGAACATGTTCACCATGATAGACCTGAGGTTTTGAAAAAAGAAATTGATATAGTTCAGCTTCAATGGTACGGGTATTGCATGTTCAGGGCCCTTTATTGCTTGCACAAAGAGGGAGTTGTTCACAGAGACATTAAACCTGGAAACTTCCTTTTCTCTCGAAAGCTAAGCAAAGGCTATCTTATTGATTTTAACCTTGCCATGTTTAGTCAATTGCACATCTTTTCAGGTAAATCTAAACCAAGCCATGATGCAGCATCCAATATTGTTTCTTTCTCTTCTGGTTCTGCCCCTCTGGTCCGAGACAAGAACCTTGGAGGCAGCAAGTCTTTAACATCCAATAAAAGGGCTTTGGCAGATTATAAGAATTATTCTGAACTTAATAGGCATGTAAAGCAAAAGGATTGTACCGGTCCTCTGAAAAATTGTCCTGATAAGGCTGGTGGGAGTTTTCTTAGAGCACAAGGAACAGATGGCTCTGGTGTAACTTCTGCGAAAGATCCTAGCACTAGGACTGCTTCTGCAGAGAGGCTcagggaacctttaccttcccatggaagaaaggagcttatcagctttgtgaataccatgaaatgtgcaaacaacagttcaacaataggcccttcttcacaaaggaaaagggttactgctccctcaagcaaggtagatggcaagatttttaatattactccgatgcctttgcattcatctactgttggtgggggattaatgagaagcaaaggtgatggaaagaaaaaagaaggttcatgtgttggaaccaaaggattccgtgctccggagGTTTTGTTAAGGTCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGAGTCACTCTACTCTACATGGTGATCGGGAAGACTCCTTTCACTGGCGACCCAGAACAGAATATAAAAGAAATTGTTAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAATTATCTTTTCCAGTGGAGTTACTTGATGACCGATACTTACAGTCATGGGACTTAGAAGGCTGGTGCAAGATTCACACAAAGAGACCAGAGTTTCTTGAGCAGATCCCGAAATCGCTGTTTGATTTGATAGACAAGTGTCTAACAGTTAACCCAAGAAATAGGCTCAGTGCTGAAGATGTTCTAAGGCATGAATTCTTTGACTCACTGCATGAGTCCCTGAGGAAGCAAAGGATGCTTCATCGACATCGAGCTCTCAGGTCGGATGCAGCAGCTTCCAGAGCAATCTGA 2832 0.3888 MAESEFEPNRVHDLEEKSWHLLALLFRIGHAVYPQRLAAQCRLFAASPDFVCYVSTLPGSPLSVTDNGLVTPSVSAVFALGSFFSLRFSPPQTHRFRKRKLLFDSAEADGRERKRLAIRHGLREFSFQSFADAAEALMRSNFPVIKFESQNIGSGNFVFLLRIDKNEECSGCPMSNFEHRGANNDASTTMSNGEVSKSIIEVLTKKISIIKTSYLNCPKLVDKNRFMECNLFVVDPPCKEGIVNNLGIGKKIDYFDTFTHDCAEQNSIHHVDEDGIGKSNTCKDQPREPNEDDEVESGSKKGLIDSGTNRVKEDVAQRVNAALCGEALTNGLEQKNHVHAMNLEKESERNTGTKSTNKISNSSSTPKRPLKSSSILKGGQKNDLHPKSQILKESLVSNKFGNVPKNVDQRKNEQNLTARKQNHKENMAGNIATTTKVEKRAYPSFEAFTIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHTNAHKNHVNNERSMLERFGGKNYIIRYEGSFKNGNSDCFVLEHVHHDRPEVLKKEIDIVQLQWYGYCMFRALYCLHKEGVVHRDIKPGNFLFSRKLSKGYLIDFNLAMFSQLHIFSGKSKPSHDAASNIVSFSSGSAPLVRDKNLGGSKSLTSNKRALADYKNYSELNRHVKQKDCTGPLKNCPDKAGGSFLRAQGTDGSGVTSAKDPSTRTASAERLREPLPSHGRKELISFVNTMKCANNSSTIGPSSQRKRVTAPSSKVDGKIFNITPMPLHSSTVGGGLMRSKGDGKKKEGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYMVIGKTPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDRELSFPVELLDDRYLQSWDLEGWCKIHTKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEDVLRHEFFDSLHESLRKQRMLHRHRALRSDAAASRAI 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01028 943 MobiDBLite consensus disorder prediction 667 698 - -
Gma03g01028 943 MobiDBLite consensus disorder prediction 353 379 - -
Gma03g01028 943 SUPERFAMILY Protein kinase-like (PK-like) 437 919 IPR011009 -
Gma03g01028 943 SMART serkin_6 448 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01028 943 MobiDBLite consensus disorder prediction 273 309 - -
Gma03g01028 943 Gene3D Transferase(Phosphotransferase) domain 1 407 605 - -
Gma03g01028 943 Gene3D Transferase(Phosphotransferase) domain 1 758 940 - -
Gma03g01028 943 ProSiteProfiles Protein kinase domain profile. 448 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01028 943 MobiDBLite consensus disorder prediction 343 385 - -
Gma03g01028 943 Coils Coil 406 426 - -
Gma03g01028 943 PANTHER CASEIN KINASE-RELATED 417 925 - -
Gma03g01028 943 Pfam Protein kinase domain 450 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01028 943 Pfam Protein kinase domain 772 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01028 943 MobiDBLite consensus disorder prediction 757 777 - -
Gma03g01028 943 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 417 925 - -
Gma03g01028 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 560 572 IPR008271 GO:0004672|GO:0006468
Gma03g01028 943 MobiDBLite consensus disorder prediction 676 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01028 Gma-Chr3 34461425 34468416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01028 762 917 Core Cell Cycle Gene Families AT3G48750 31.288 1.69e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Gma03g01028 Pkinase 2.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01028 K02214 - gmx:100783107 1840.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01028 03 34461425 34468416 Gma07g01054 07 12885848 12893186 GST