Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01026 ATGGAAGGAGGAGAGAGAGGTGTTAATCCCAATAATTATGAGCTCCAAGTTTCATTCGCAAACACCCCTCAAGCCATCCATGAAATGGGTTTTGTTCAATTTGAAGAAAACCAGGTTCTTAGCTTCTTGGCACCCTCTGCTCAATCCCAATCTTCTCAGCTCTCTCAATCTCTAAACGCCGGCAACGGTGGCAGCAATACTGCTGTTGCTGCCGCTACCACAACCGCCACCGCCACCACCTCCGGATCCGGAGCAACAATTGGTTTCAGCCATAATGACCTTGTATCCAGAACTTGTTGGAATAATAATGAACAGGTGGTGCGAACACTGGATCCCAAAGCTGTCAATGATGAAAATTGCACCGGAAATACTAGTGATGGTGGCAACAACTCATGGTGGAGAAGTGCTGGCTCAGAGAAGAACAAGATGAAAGTGAGGAGGAAGCTGAGGGAGCCACGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTGCTTGATGATGGTTATAAATGGAGGAAGTATGGTCAGAAAGTTGTCAAGAATAGCCTTCACCCAAGAAGCTACTACCGCTGTACCCATAACAACTGTAGGGTGAAGAAAAGAGTTGAACGACTCTCTGAAGATTGTCGTATGGTAATAACTACCTATGAAGGCAGACACAACCACTCTCCTTGTGATGACTCAAATTCATCGGAACATGAATGTTTCACCTCTTTTTGA 720 0.4514 MEGGERGVNPNNYELQVSFANTPQAIHEMGFVQFEENQVLSFLAPSAQSQSSQLSQSLNAGNGGSNTAVAAATTTATATTSGSGATIGFSHNDLVSRTCWNNNEQVVRTLDPKAVNDENCTGNTSDGGNNSWWRSAGSEKNKMKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01026 239 Pfam WRKY DNA -binding domain 166 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01026 239 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 18 237 - -
Gma03g01026 239 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 237 IPR044810 GO:0003700
Gma03g01026 239 MobiDBLite consensus disorder prediction 118 137 - -
Gma03g01026 239 MobiDBLite consensus disorder prediction 118 138 - -
Gma03g01026 239 SMART WRKY_cls 165 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01026 239 SUPERFAMILY WRKY DNA-binding domain 157 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g01026 239 Gene3D WRKY domain 151 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g01026 239 ProSiteProfiles WRKY domain profile. 160 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01026 Gma-Chr3 34349217 34357334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01026 1 239 WRKY Transcription Factor Family AT2G44745 55.691 7.44e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g01026 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01026 - - gmx:100788263 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01026 03 34349217 34357334 Gma03g01026 03 34349217 34357334 ECH
Gma03g01026 03 34349217 34357334 Gma09g02234 09 47943684 47949476 PCT