Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01002 ATGTCCTTCAATCAATCAAAGTCGGAGAAGAACGACGCGGTTTATCGAAAAACCGGGCGATCCGCCAGCTTCAATCAGCAGAGAGGAGGCTCCTATGGCAGGGGTGGCGGCGGCGGCGGGGCCGCGCCGTCGAGCAGTTCACTCTCCTTTAGCCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCCCCAGGGCATTCAACAGAGTCCAATAGTGCATCTACTGCCCAAACCATTAATGGTTCCCATGTACAGCCACAATTACATGGAGCATCAGATGGGCCAGCTACAAAGTCATCTGAATCACCAGCTGCTCATAGGAGTGCTGGAATTCTTCCAAAAGCTCCAACTTCTCTACAGGCCCCCTTGATTTCTGATCCACTCCCTCCCTCAAGCCCTGCTAAGGGAGATGCGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTACTCCTGGCTTTGTTAATGGGATGGCTATTCCTGCTCGTACAAGTTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCTTCACGACTCTTACAAATCTGTGCCTTCAGTGCCAATTCCTCCTGTTCCAAAGCAGCAGCAACCACCTAGGAAAGATGCTGGCGTCACTGAGCAATCTAATGCAGGGGACAGTTGGGAGAATCATCTAGGGTTTAAGGCAAAAAAGGATCCTCATGTGTCAGCTTTGACCCCGGCAAGCCAGATGCCTAAGTCCTCTGTTCCTGTAACTGGGATTTCAATGTCAACTCCATATCACCAGTCACAGGCTCCTTTACAGTTTGGCGGTGCTAATCCACAGATTCAATCTCAGGGTATGTCAGCGGCATCCCACCAGATGCCTATACCGATGCCTTTACCAATTGGCAATGCTACACAGGTGCAACAGCCAGTTTTTGTTCCAGGTCTTCAACCTCATCCAATGCATCCTCAGGGGATCAGGCATCAAGGCCAAAACATGAGTTTTGCTCCTCAAATGGGTCATCAGTTGCCCCATCAATTAGGTAGCATGGGCATTGGTATCGGCCCTCCATATCCCCAGCAGCAAGGAGGAAAATTTGCTGCTCCTCGAAAAACTACTGTAAAGATAACTCATCCTGAGACACACGAAGAGCTGAGGCTTGATAAAAGGACAGATGCATATTCAGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAACATACCTTCTAAGTCACCTGGTAAATCTTTTCCGGCTTCTCATCCTGCGAACTACTATTCTTCCAGCTCATACAATACCAATTCTCTCTATTATCCACCTAGTTCTCTTCCATTAACAAGTAACCCGATGTCTCCTAATTCTCAGCCACCAATATTTAATTTTACTGTGAATCATGGTCCGCAAGGCGTGAATTTCATGAATTCATCATCACGTGGTTCCCCATCTATTAATAAAGCTAGCACTCCAACAGAGGATGCATCTCTGACCATTAAGCCAAGTGGTACGTCTGCTATTGTGGACTCATCATTGTCCAATTCCAGTATTTCTGATGTTCAAAATACAGAATCCCCTAGTTCAACAGCATCTTGTGATGCTAGCTCCTCTGTGCTGCAAAAAGGGTCTGAAACTTGTTTGGAAATCTTTTTACAACAGCACAAGTTGTCTAGTGATTCTGTCCCAGTTGTGTCTAATAATGAAGGCAGGAGGGAATCTCTTAGTAGGTCCAACTCTTTGAAGGATAAGAAACCAGGGAAGAAAGATCAATTATCACAGCATCAGGTTTCTGTACAATCTCCCACAGCGGATAATATGCCTTCTCATGCTGTTGACCATGGTATATCTGATACTGGAGTTTCCAAACCTGTAGGAACTAAAACAAACCATTCTGCGGAAATTACCACTGAAGACCTTCCAACATCTAATACAATACCTAGTAGCACTTCTACTGCTGAAGTGAAAACCAATGGGTCTGCAGAAGTTTCTACTTTTGTATCTGGTGCACAAACTGTTGACAGAGTGCACAATAGTAATCCTGATAAGATAGATGAATTAGCTGAAGGAAAATTTGGCATATCAGATCTGCAGTCTGCTGATCTTCCAGAGACAACATCAATGCATGTCAAGGATGCCTCAGAGAATACTGGCGGTGAGTCAGGTACCAAGGATAGACCAACTATAGAACCAAATAAGGTGAAAACTACATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACATCTGATCTTTATAATGCATACAAGGGACCTGAGGAAATGAAAGAAGCTGTCTTAAGTTCTGAGAGCACAGAAAGTACCACCACTTTGAAGCAGTTGCCAAAAGATGCTGCTCAGTCAGATGCTTTAGCAAGTGAAAAGTGTGGTCACAGTAAAGCTGAACTCGATGACTGGGAGGATGCTGCTGACATGTCTACCCCCAAACTGGAGGTTCATGATAAATCTCAACAAGCTGGTGATGGAAGTGGAAGTACAGCCAAAAAGTATTCACGTGATTTCCTTCTGAAATTTGCAGAGCAGTGCATGGATCTTCCTGAAGGTTTTGAAGTCACCACAGACATTGAATCTTTGATGAGTGCCAATATTGGTAGTTCTCATGTTTTCGAGCGTGATTCACATCCTAGTCCTGGAAGAATTGTAGATAGACCAGGTGGGATGTCTCGGATGGATCGCCGTGGGGATGTGGTAATGGAGGATGACAGATGGAGTAGAGTTTCTGGTGCTTTTCGTTCTGGACGTGGTTTGGATGGCATTGGAGGTAATGTGGGATTCCGATCTGGCCAAGGAGGCAATTTTGGTGTCTTAAGGAACCCTCGTGCACAGACACCACCACAATATGTTGGAGGGATCCTTTCTGGGCCAATGCAATCAGTGGGAAATCATGGTGGAAGAAATAATCCTGATGGGGAGAGGTGGCAGCGTTCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCTACCCAAACTCCTTTACAGATGATGCACAAAGCTGAGAATAAGTATGAGGTGGGTAAAGCAACAGATGTGGAAGAGGTAAAGCAGAGGCAGTTGAAGGCTATCTTGAACAAACTAACTCCGCAGAATTTTGATAGACTTTTTGAACAGGTGAAAGCAGTTAATATTGACAATGCAGTCACCCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTTCATCTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAGATAACCTTTAAAAGGTTATTATTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTGCTGAGGAAAGAGAAGAAAGAAGAGTTAAGGCTAGAAGACGCATGTTGGGAAACATCAGATTGATTGGAGAACTATACAAGAAGAAAATGTTGACAGAGAGAATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAAGAAGACATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGTACATATGGATGCATATTTTGAAAGGATGAAATTATTGTCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAAGATTCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTAGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGGGATGCCGCTCAGGAGAGGCAGGCCCAAGCTGGTAGGCCAGGTCGCGGTCTTGGTAACAATCAATCAGCTAGACGGAATCCCATGGATTTTGGTCCAAGAGGATCTATGCTGTCTTCTCCCAATTCTCAAATGGGTGGATTGCGTGGTCTTCCTACTCAAGTTCGTGGGTATGGTGCTTCTCAGGATGCTCGATTTGAGGAACGACAATCTTATGAGGCTAGGACCTTGTCGGTTCCTTTGCCTCAAAGACCCTTAGGAGATGATTCTATAAACTTGGTACCCCAAGGTGGTCTCGGTAGGGGAATGTCTACGAGAGGATCAACAGCAATTTCCAATTTGCCAATATCTGATGTGCTTCCTGTCCATGGAAACTCTCATAGAATGAATATAGGTCTTAATGGTCACAGCAATTTATCGGAGTGCACACCATATAGCTCAAGGGAGGATCTTGTTTCAAGATATGGTAATGTTAGGTCTTCAGGGCCATCTGCTTATGATCAATCAAGTGCTCCAGAGCGTAATGTAAACCATGATAACAGAGACTGGAGGAGTGCAGATCGGAATCTTGAACCTCCTGCTCATTTGCAAGGGTCAATGGTCTCTCAGAATGCTTCTTCAGAGAAGATTTGGCCAGAAGAACGACTGAGGGACATGTCCTTGTCAGCAATAAGAGAATACTACAGTGCTAGAGATGAGAACGAACTTGCTTTATGTGTCAAAGATTTGAACTCTCCGAGCTTCCATCCTTCCTTGGTTTCTCTCTGGGTCACGGATTCATTTGAGAGAAAGGATGCGGAAAGAGATCTTTTGGCCAAACTACTTGTCAACCTTGTGAAATCTCAGCATGGAACCTTGAATCAAGTTCAGCTCATTAAAGGGTTTGAATCTGCTCTCAGTACATTGGAGGATGCTGTTAATGATGCTCCCAGAGCAGCAGAGTTTCTTGGCCGAATTTTTGCAAAAGCCATAACAGAGAATGTAGTTTCTTTGAAGGAGATTGGGCAGTTAATACATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACTTTGGAGGTAATTCAAAGCGAGAAGGGGGACGCGGTTCTAAACGAGATGCGTTCAGACTCTAACTTGAGAGGGGAAAAGTTATTTGGCTAG 4968 0.4452 MSFNQSKSEKNDAVYRKTGRSASFNQQRGGSYGRGGGGGGAAPSSSSLSFSRSFNKKSNNAQGGQSRVNPPGHSTESNSASTAQTINGSHVQPQLHGASDGPATKSSESPAAHRSAGILPKAPTSLQAPLISDPLPPSSPAKGDASKAFPFQFGSITPGFVNGMAIPARTSSAPPNLDEQKRDQALHDSYKSVPSVPIPPVPKQQQPPRKDAGVTEQSNAGDSWENHLGFKAKKDPHVSALTPASQMPKSSVPVTGISMSTPYHQSQAPLQFGGANPQIQSQGMSAASHQMPIPMPLPIGNATQVQQPVFVPGLQPHPMHPQGIRHQGQNMSFAPQMGHQLPHQLGSMGIGIGPPYPQQQGGKFAAPRKTTVKITHPETHEELRLDKRTDAYSDGGSSGARSHPNIPSKSPGKSFPASHPANYYSSSSYNTNSLYYPPSSLPLTSNPMSPNSQPPIFNFTVNHGPQGVNFMNSSSRGSPSINKASTPTEDASLTIKPSGTSAIVDSSLSNSSISDVQNTESPSSTASCDASSSVLQKGSETCLEIFLQQHKLSSDSVPVVSNNEGRRESLSRSNSLKDKKPGKKDQLSQHQVSVQSPTADNMPSHAVDHGISDTGVSKPVGTKTNHSAEITTEDLPTSNTIPSSTSTAEVKTNGSAEVSTFVSGAQTVDRVHNSNPDKIDELAEGKFGISDLQSADLPETTSMHVKDASENTGGESGTKDRPTIEPNKVKTTSKGKKKRREILQKADAAGSTSDLYNAYKGPEEMKEAVLSSESTESTTTLKQLPKDAAQSDALASEKCGHSKAELDDWEDAADMSTPKLEVHDKSQQAGDGSGSTAKKYSRDFLLKFAEQCMDLPEGFEVTTDIESLMSANIGSSHVFERDSHPSPGRIVDRPGGMSRMDRRGDVVMEDDRWSRVSGAFRSGRGLDGIGGNVGFRSGQGGNFGVLRNPRAQTPPQYVGGILSGPMQSVGNHGGRNNPDGERWQRSASFQQRGLIPSPTQTPLQMMHKAENKYEVGKATDVEEVKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCFHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKQSAEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKVHMDAYFERMKLLSNNMNLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRPGRGLGNNQSARRNPMDFGPRGSMLSSPNSQMGGLRGLPTQVRGYGASQDARFEERQSYEARTLSVPLPQRPLGDDSINLVPQGGLGRGMSTRGSTAISNLPISDVLPVHGNSHRMNIGLNGHSNLSECTPYSSREDLVSRYGNVRSSGPSAYDQSSAPERNVNHDNRDWRSADRNLEPPAHLQGSMVSQNASSEKIWPEERLRDMSLSAIREYYSARDENELALCVKDLNSPSFHPSLVSLWVTDSFERKDAERDLLAKLLVNLVKSQHGTLNQVQLIKGFESALSTLEDAVNDAPRAAEFLGRIFAKAITENVVSLKEIGQLIHDGGEEPGSLLEVGLAADVLGSTLEVIQSEKGDAVLNEMRSDSNLRGEKLFG 1655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01002 1655 MobiDBLite consensus disorder prediction 42 111 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 701 718 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 373 391 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 816 837 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 210 224 - -
Gma03g01002 1655 SUPERFAMILY ARM repeat 1022 1250 IPR016024 -
Gma03g01002 1655 SMART ma3_7 1481 1595 IPR003891 -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 1249 1272 - -
Gma03g01002 1655 Gene3D - 1475 1654 - -
Gma03g01002 1655 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 488 1648 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 1118 1142 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 395 412 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 587 602 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 454 530 - -
Gma03g01002 1655 Coils Coil 1108 1140 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 1439 1454 - -
Gma03g01002 1655 Gene3D - 1026 1261 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 771 786 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 570 586 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 1249 1313 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 373 417 - -
Gma03g01002 1655 Pfam MA3 domain 1486 1593 IPR003891 -
Gma03g01002 1655 Pfam MIF4G domain 1026 1248 IPR003890 GO:0003723|GO:0005515
Gma03g01002 1655 MobiDBLite consensus disorder prediction 1421 1438 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 1 227 - -
Gma03g01002 1655 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 488 1648 IPR045208 GO:0003743
Gma03g01002 1655 ProSiteProfiles MI domain profile. 1480 1604 IPR003891 -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 1421 1472 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 701 740 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 878 901 - -
Gma03g01002 1655 SMART if4_15 1026 1248 IPR003890 GO:0003723|GO:0005515
Gma03g01002 1655 SUPERFAMILY ARM repeat 1476 1651 IPR016024 -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 553 569 - -
Gma03g01002 1655 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 116 451 - -
Gma03g01002 1655 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 116 451 IPR045208 GO:0003743
Gma03g01002 1655 MobiDBLite consensus disorder prediction 553 652 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 766 802 - -
Gma03g01002 1655 MobiDBLite consensus disorder prediction 617 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01002 Gma-Chr3 33822197 33831287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01002 1 1653 Eukaryotic Initiation Factors Gene Family AT3G60240 46.775 0.0 1288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01002 K03260 - gmx:100819084 3128.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01002 03 33822197 33831287 Gma03g01002 03 33822197 33831287 ECH
Gma03g01002 03 33822197 33831287 Gma08g03152 08 48243043 48252470 PCT