Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00999 ATGAAGAAGAATTGGGTTCGCGGAGAGTCTCTTGGTAGTGGCAGCGCCGCCACCGTCAACATAGTCATACCAACAAACCCTTCCACGCACAATTTTCCTTCACCCACCGCCGTCAAATCCTCCCTTTTCCTAACCTCGTATTCGCTCAAAACCGAGAAGGACGTCCTCGACATTCTTGGACCTTCCCCAAACATCATTAAATGTTACGGCAACGATTGCACTGTCGAAAACGGCAAGAGATACTACAACGTTTTTCTCGAATACGCCGCGGGCGGTTCCCTCGCCGATCAACTCAAAAAGTACGGCGGGAGGTTCCCGGAGGCTTGCGTTCGACAATGCACAAAATCCATCTTGGAGGGTCTGAAGCACATTCACTCCAAGGGCTACGTCCACTGCGATGTGAAGCCTCAGAACATTCTTGTCTTCGACAATGGTGTTGTTAAGATCGCGGATTTGGGGCTGGCCAAGAGGAGAGGGGAGATAAATAGAGAGTACGTGTGCAGGGGCACGCCGATGTATATGTCACCGGAATCGCTGACCGATAACGTGTACGAGTCGCCGGTAGATATATGGGCTTTGGGCTGCACCATCGTGGAGATGATCACAGGAGAACACGCGTGGTACGTTGGAAGCTGCGAGAATACTTGGACGTTGATGAATCGAATTGGGATAGGAGAAGAATTGCCCAAGATTCCACAAGAGTTATCACAACAAGGGAAGGATTTTCTTGGCAAGTGTCTTGTTAAGGATCCAAACAAGAGGTGGACTGCTCACATGCTTTTGAATCACCCTTTCATCAAGAACCCATTGCCCCAGCCGTTACCAAGAAAAACTGATAGACCTGCATGCATGCCAAAAGGGATACCTTGCACTCATCAGGCTAAAATGGGAGAAGGAAAAGATTTTCTTGACAAGTGTCCCGGGAAAAGTGCTACGCCCGCATGCATGCCAAAAGGGATACCTTGCACTCATCAGGATAAAATGAGAAGACACTGCATAAAGGTGGTGGTGATGAAGAGAAAGAGCACACTTTCCCGGTTGTGTGAGACAAAGTGGTGGAACAACCTATGCCAACATGGGACAAGAAGAAAAACCAAGCAGATCAAGAGTTCTTGTGTTGTGTTTCATGACATGGAGGGTGTGCAACTATCTTCCATAATTGGAAAGGACAGCAACATTAATCATCCAAGGATTTTCAGCTACGCTGAGCTCTACATAGGATCAAGGGGTTTCTCTGAGGAGGAGGTTCTAGGAAGTGGAGGGTTTGGCAAAGTGTACAGAGCTGTTAATTAA 1293 0.4803 MKKNWVRGESLGSGSAATVNIVIPTNPSTHNFPSPTAVKSSLFLTSYSLKTEKDVLDILGPSPNIIKCYGNDCTVENGKRYYNVFLEYAAGGSLADQLKKYGGRFPEACVRQCTKSILEGLKHIHSKGYVHCDVKPQNILVFDNGVVKIADLGLAKRRGEINREYVCRGTPMYMSPESLTDNVYESPVDIWALGCTIVEMITGEHAWYVGSCENTWTLMNRIGIGEELPKIPQELSQQGKDFLGKCLVKDPNKRWTAHMLLNHPFIKNPLPQPLPRKTDRPACMPKGIPCTHQAKMGEGKDFLDKCPGKSATPACMPKGIPCTHQDKMRRHCIKVVVMKRKSTLSRLCETKWWNNLCQHGTRRKTKQIKSSCVVFHDMEGVQLSSIIGKDSNINHPRIFSYAELYIGSRGFSEEEVLGSGGFGKVYRAVN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00999 430 CDD STKc_MAPKKK 4 266 - -
Gma03g00999 430 SUPERFAMILY Protein kinase-like (PK-like) 3 288 IPR011009 -
Gma03g00999 430 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 269 - -
Gma03g00999 430 Gene3D Transferase(Phosphotransferase) domain 1 96 284 - -
Gma03g00999 430 SMART serkin_6 5 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00999 430 ProSiteProfiles Protein kinase domain profile. 5 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00999 430 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Gma03g00999 430 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 4 269 - -
Gma03g00999 430 Pfam Protein kinase domain 7 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00999 430 Gene3D Phosphorylase Kinase; domain 1 383 430 - -
Gma03g00999 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Gma03g00999 430 SUPERFAMILY Protein kinase-like (PK-like) 393 430 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00999 Gma-Chr3 33753438 33759038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00999 5 266 MAP Kinase Kinase Kinase AT4G36950 53.208 2.26e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma03g00999 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00999 - - gmx:100816949 890.567