Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00997 ATGAATTGGGTTCGCGGAGAGTCTCTCGGCAGTGGCAGTTTCGCCACCGTCAACATAGCCATACCGACAAACACTTCCACTCAGTTTCTTTCTTCCACCGCCGTCAAATCCTCCCATGTTCAAACCTCGTCTATGCTGAAAAACGAGAAGGAAATACTCGATCGCCTTGGAGCTTCCCCTTATGTCATTAACTGTTTCGGCGACGATCACACGGTAGAAAACGGAGAAGAGTATTACAACATTTTCCTCGAATACGCCGCAGGTGGTTCTCTCGCTGATCAGGTAAAAAAACACGGAGGGAGGCTCCCGGAGTCTTACGTTCGGCGTTGTACGAGGTCGCTCGTCGAAGGTCTAAAACATATTCACGACAACGGTTATGTTCACTGCGATGTGAAGCTTCAAAACATTCTCGTTTTCCAGAATGGGGATGTTAAAATCGCGGATTTTGGGCTTGCAAAGGAGAAAGGGGAGAAACCGGGGAAATTGGAGTGCAGGGGAACACCGCTGTTTATGTCTCCGGAATCGGTGAACGACAATGAGTATGAATCTCCGGCGGATATATGGGCCCTTGGCTGCGCCGTCGTGGAGATGGTGACGGGAAAACCCGCATGGGATGTTCGCGGGTCGAATATCTGGTCGTTGTTGATTCGAATTGGAGCGGGAGAAGAATTGCCGAAGATTCCAGAAGAGTTATCAGAAGAGGGAAAAGATTTTCTTTTGAAGTGTTTCGTTAAGGATCCAATGAAGAGGTGGAGCGCTGAGATGCTTTTGAATCACCCTTTCGTCAACGGTGAAACCGTTTCGTTTCAGAAAGTTAATGAGCCGTTGCCGTTACCGTCGCCGTCACCGTCTCCGAGGACACACTTTGATTTAACTCACTGGGCTTCCACCTTAACGGCGTCGCTTCCGTCTTCCCCGGATTCTGATGAGTGGCGTATGTGGGAATTCGGGTCGTCGTGTTCGCCGGAGAATAGACTCCGGCGGCTTGTAACCGTTCAGACGCCGGCGAATTGGTCAGAATCGGATGGCTGGACAAGCATTAGGTGA 1047 0.5024 MNWVRGESLGSGSFATVNIAIPTNTSTQFLSSTAVKSSHVQTSSMLKNEKEILDRLGASPYVINCFGDDHTVENGEEYYNIFLEYAAGGSLADQVKKHGGRLPESYVRRCTRSLVEGLKHIHDNGYVHCDVKLQNILVFQNGDVKIADFGLAKEKGEKPGKLECRGTPLFMSPESVNDNEYESPADIWALGCAVVEMVTGKPAWDVRGSNIWSLLIRIGAGEELPKIPEELSEEGKDFLLKCFVKDPMKRWSAEMLLNHPFVNGETVSFQKVNEPLPLPSPSPSPRTHFDLTHWASTLTASLPSSPDSDEWRMWEFGSSCSPENRLRRLVTVQTPANWSESDGWTSIR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00997 348 Pfam Protein kinase domain 5 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00997 348 SUPERFAMILY Protein kinase-like (PK-like) 3 306 IPR011009 -
Gma03g00997 348 Gene3D Transferase(Phosphotransferase) domain 1 2 290 - -
Gma03g00997 348 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 309 - -
Gma03g00997 348 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Gma03g00997 348 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 309 - -
Gma03g00997 348 CDD STKc_MAPKKK 2 262 - -
Gma03g00997 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Gma03g00997 348 SMART serkin_6 3 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00997 348 ProSiteProfiles Protein kinase domain profile. 3 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00997 Gma-Chr3 33737510 33738556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00997 1 348 MAP Kinase Kinase Kinase AT4G36950 52.691 8.62e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma03g00997 Pkinase 9.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00997 - - gmx:100782937 713.761