Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00988 ATGCAAAGACTAAAAACCAAGGAGACTCCAAGCTTCAATTCCTATGCATTGTATGCATATGAAACTGTTTGGTTAGTAGCCCGGGCTCTTGATGCTTTTGTCAAAAAAGGTAGTGTTGTGTCTTTCTCCTTTGACCCTAAGTTGCTCGAAACAAATGGAAGCATGTTGCATTTACATTCACTTCATGTTTTTGATGATGGCCCTTTGTTTCTTGAGACAATTTTGAGCACCAATTTCTCTGGTCTGACTGGAACAACTCACTTTGATATTGAAAGGAATAGAAATCATCCAGCATATGATATGTTGAATATTGGAAGATGTGGAATGCGCAAAATTGGTTATTGGTCTAATTACTCAGGTCTCTCAGTTGTCACTCCAGAAATTTTGTATAAGAAACCAGCTAACACTTCAACAAGCAGCCATCAACTGTATGGTGTTATATGGCCTGGAGAAACTGCAACTAAACCAAGAGGTTGGGTGTTCCCCAACAATGGAAAGCCACTGAGAATAGCAGTTCCTAACCGAGTAAGCTACAAGGAGTTTGTTTCTAAAGACAATAACCCTCCTGGAGTAACAGGCTATTGCATTGTCTTGGAAGCTGCCATAAAGTTGGTGCCTTATCCTATCCCACGAGAATATATATTATTTCGACCTGGTAATATAAATCCTAGCTATGATGACCTTGCAAGTCAGGTTACACTAAATGGTTGGTTGAGGTCTCTTCAGACATAA 732 0.3962 MQRLKTKETPSFNSYALYAYETVWLVARALDAFVKKGSVVSFSFDPKLLETNGSMLHLHSLHVFDDGPLFLETILSTNFSGLTGTTHFDIERNRNHPAYDMLNIGRCGMRKIGYWSNYSGLSVVTPEILYKKPANTSTSSHQLYGVIWPGETATKPRGWVFPNNGKPLRIAVPNRVSYKEFVSKDNNPPGVTGYCIVLEAAIKLVPYPIPREYILFRPGNINPSYDDLASQVTLNGWLRSLQT 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00988 243 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 233 - -
Gma03g00988 243 Gene3D - 12 96 - -
Gma03g00988 243 Pfam Receptor family ligand binding region 7 104 IPR001828 -
Gma03g00988 243 Gene3D - 10 121 - -
Gma03g00988 243 SUPERFAMILY Periplasmic binding protein-like I 11 160 IPR028082 -
Gma03g00988 243 PANTHER GLUTAMATE RECEPTOR 3.4 3 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00988 Gma-Chr3 33626465 33627296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00988 7 235 Ion Channels AT2G32390 57.826 2.33e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00988 K05387 - gmx:100783715 429.869