Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00954 ATGGGGAAGAAGCAGAACGAGATCCAGAAAACAGGGCTAGGTCGAGCCTTGGTGAAGCAGCACAACCAGATGATCCAACAGAGCAAGGACAAGTCTCGCTTCTACAGGAAGAAGTTCCTTGAATCCTTCACCGAAGTCTTCGACATCGACGCCGTCGTTGAGCAATCCCTAGAACCCCTCCCCGAACTCGCCGCTGTCGCTTCAACCACTCTTATCAACCTTGAACCAGGTTTCGTGCCTGATGAAACGACGACACCAGAAGAAGCAAGGAAGCAGCAGAAGCAAGAGGAGGCACTCCACACCAGCAGCCTCCGCGTTCCTCATCGCTCGCCGTGGACTCCCAACATGTCCGCCGATGAGCTGAACAACAGCGAAACACAAGCTTTCTTGACCTGGCGCCATAGCTTGGCGAGTCATCAATGGCCAATTTGTACGATTGGTGAAGGTACATTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGACGGGAGAACCTGTGGCTCTTAAAATTCTTGATAAGGAGAAGGTGCTAAAGCACAAGATGGCTGAGCAGATCAGGAGAGAAGTAGCTACAATGAAACTAATCAAGCATCCAAATTTTGTTCGATTGTGTGAGCAGATGGTAATGGTTGAGTCTAGAACTTTCTTGCATGTTTCACTAAGAATTGATTCTAGAATTTTTGGAGGATAA 690 0.4826 MGKKQNEIQKTGLGRALVKQHNQMIQQSKDKSRFYRKKFLESFTEVFDIDAVVEQSLEPLPELAAVASTTLINLEPGFVPDETTTPEEARKQQKQEEALHTSSLRVPHRSPWTPNMSADELNNSETQAFLTWRHSLASHQWPICTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREVATMKLIKHPNFVRLCEQMVMVESRTFLHVSLRIDSRIFGG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00954 229 ProSitePatterns Protein kinases ATP-binding region signature. 146 169 IPR017441 GO:0005524
Gma03g00954 229 Pfam Protein kinase domain 145 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00954 229 MobiDBLite consensus disorder prediction 76 119 - -
Gma03g00954 229 Gene3D Phosphorylase Kinase; domain 1 136 218 - -
Gma03g00954 229 MobiDBLite consensus disorder prediction 84 103 - -
Gma03g00954 229 PANTHER SERINE/THREONINE KINASE 145 208 - -
Gma03g00954 229 PANTHER CBL-INTERACTING PROTEIN KINASE 32 145 208 - -
Gma03g00954 229 ProSiteProfiles Protein kinase domain profile. 140 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00954 229 SUPERFAMILY Protein kinase-like (PK-like) 137 206 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00954 Gma-Chr3 32945019 32948815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00954 145 207 CBL-interacting serine-threonine protein kinases AT2G26980 92.063 6.02e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma03g00954 Pkinase 2.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00954 K14539 - gmx:100817523 246.128