Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00939 ATGATAAAAACAAACACTAGTACTAGTGGTTCACCAAAACTTCATCGCAAAACTATTCAAAGGAACCGTAGGATTCACATTAAATCTCTCTGCTTCAAGTATCTTTCCTCTATTCCTTACAATGACCTCAAACCCACCAAGGACATGCTTTACCAGCAGGATCAGCTTGATCTAGCAGCCACGTACATAAAGCATCTAAAGGAAAGAATACAAAAATTGAAGGGGGAGAAGGAGATTTTCAATATTGGCTCACAGTTGCCTCTAATTGAGATAAAGGACTTGGGTTTGGGCATTGGAGTGAAGTTGATAAGTGGGTTAAATAAGAACTTGATGCTCTATGAAGTAATTAGTGTCCTCGAGGAAGACGGTGCAGAAGTTGTCACTGTTAACTTCTCTACAGTTGCTGATAAATTTTTTACACGGGTCATGCTCAGGTGGCTTGGGGGCTTGCTGTCCTTGGCAACCTTATCGAGTCAAAGCGAGGAGGATACATCATGCATTTTCGGCAACATTACCTCTGCTACATTGGTAGAGTTTGGAAGAAAAGGAGACACAATCATCAAAGCTTTAGACGATATTGTTCCAGAAGATGACTGTGGAAAGTTAACAGATGCAATGCATGCAATTTTGCATGCAAGGGGCTCTAAGTTGAAGATAGATAGGATTCTTAATATTTGTCAGGCTTCTCAATCCTTATCAGGGCAAAAGAACCAAAATAAATTCAAAGTTCTAAACCATAGACTCTTGGCCATCCTGATGGAGCAGGTGGCTTTGAATCAGCAGGCGCATGAATTCTACCAGAAACCTGATGAAATGGTTGTTACCATATTTGCAAAGGGCATTCCACAACACATCATTATTGTTGACTTTGGTGAACAAATATTAAGTGTTACAATTAGTATCCCTTGCAAAGATGCATATGCCTTCCAATCTGGCTTATTTGGAAAGGTTGGTACACTTGGTTCCTCTACCCTAACACTTCATTTCAGGAGAAAGAAGAAAAACTTGATGGTGATGCTTCGTTCAACAAATGTTCTTGCTACCGCTACAGAATTAGCACCACTAGCATTTCCATTATCAGAAACAGAACCTTGA 1095 0.4 MIKTNTSTSGSPKLHRKTIQRNRRIHIKSLCFKYLSSIPYNDLKPTKDMLYQQDQLDLAATYIKHLKERIQKLKGEKEIFNIGSQLPLIEIKDLGLGIGVKLISGLNKNLMLYEVISVLEEDGAEVVTVNFSTVADKFFTRVMLRWLGGLLSLATLSSQSEEDTSCIFGNITSATLVEFGRKGDTIIKALDDIVPEDDCGKLTDAMHAILHARGSKLKIDRILNICQASQSLSGQKNQNKFKVLNHRLLAILMEQVALNQQAHEFYQKPDEMVVTIFAKGIPQHIIIVDFGEQILSVTISIPCKDAYAFQSGLFGKVGTLGSSTLTLHFRRKKKNLMVMLRSTNVLATATELAPLAFPLSETEP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00939 364 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 96 144 IPR015660 GO:0003700|GO:0006357
Gma03g00939 364 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 77 IPR015660 GO:0003700|GO:0006357
Gma03g00939 364 SUPERFAMILY HSP20-like chaperones 261 318 IPR008978 -
Gma03g00939 364 PANTHER OS01G0108400 PROTEIN 9 77 - -
Gma03g00939 364 PANTHER OS01G0108400 PROTEIN 96 144 - -
Gma03g00939 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 85 IPR036638 GO:0046983
Gma03g00939 364 Pfam CS domain 263 321 IPR007052 -
Gma03g00939 364 Gene3D - 261 343 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00939 Gma-Chr3 32537587 32542693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00939 1 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 31.288 1.57e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00939 - - gmx:100811485 220.32