Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00891 ATGCCCCTCCTCCGCCACCTTCACCTCGTCGGCAACTTCTTCTCCGACCAGATCCCTCCCGAGTACAGCACCTGGCAGCACCTCCAGGATTTTCTGCTCAAGAGGTCTTACTTGTTTGGATTTGAATGGAGTCTGGTGTTGGAGAGGATGGTGATGGAACCGGTGACGACGTCGCCATGGTGGTACCAGAGAGGAAGTAGTAGTTTTTGGAGCAAGAGGCCTTCAGCATTCGGATCATTGGGGAAGCCGAGGGTGTTTTCATTCAGGTATTATAGAGGGATGAAGTCACCGTTCTTTCAGTGGAGGGGTTTTTTCCCGTTGTTGGAGTCAAGCGTGAGGTACGACAGCAGGGGAGTTCGTCGCGACGGTGTTGACGTGCGGAGCAAGTTGATAGCGAGTCCGATGTTTTTGCGGTCGTCAGGGGTGGCATCTGCGGTGGCATTCTCGTCGAGCCGGCTGAGGTGCGGGGATCTCGAGGCGCTGCTGTCACTGGAGAGGTTTAACCAGAGGTAA 513 0.5497 MPLLRHLHLVGNFFSDQIPPEYSTWQHLQDFLLKRSYLFGFEWSLVLERMVMEPVTTSPWWYQRGSSSFWSKRPSAFGSLGKPRVFSFRYYRGMKSPFFQWRGFFPLLESSVRYDSRGVRRDGVDVRSKLIASPMFLRSSGVASAVAFSSSRLRCGDLEALLSLERFNQR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00891 170 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 28 139 IPR044675 -
Gma03g00891 170 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 28 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00891 Gma-Chr3 31735099 31740211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00891 33 170 C3H Transcription Factor Family AT3G18930 49.650 6.61e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00891 - K19041 gmx:100806115 201.83