Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00889 ATGAAGTATTTTTCTTTCATGTTACTAGCATTTTCATCTATACATGCCCACTTGTTTTCTCTCTTTGCATTAAATTCACTATGGTCTACCTTTGCATTAGGAAATGAGACGGATCAGTTGGCACTGCTCAAATTCAGGGAATCCATATCTACCGACCCATATGGAATTTTCCTCTCTTGGAATAATTCTGCTCACTTCTGTAACTGGCATGGAATCATATGTAATCCCACACTTCAAAGAGTTACAGAGTTAAACTTATTAGGATACAAGTTGAAGGGAACCATATCCCCTCACGTAGGCAATCTCTCTTATATGAGAAGCTTGGATCTCGGAAACAACAGCTTCTATGGAAAAATCCCACAAGAATTGGGACAATTGTCACGTCTACAGATTCTCTATGTGGATAATAACACATTAGTAGGGAAAATTCCTACAAATTTGGCAAGTTGCACTCGCCTCAAAGTCTTAGACTTAGGTGGGAACAATTTGATTGGCAAAATACCAATGAAATTTGGCTCACTTCAGAAGCTTCAACAATTGGTCCTGAGTAAGAACCGTTTAATCGGAGGAATCCCATCGTTCATAGGGAATTTTTCATCCCTAACTGATCTTTGGGTTGGTGACAACAACTTAGAGGGACATATTCCACAAGAAATGTGCAGTCTCAAAAGCTTGACGAATGTATATGTGAGTAACAACAAACTGAGTGGAACATTTCCTTCTTGTCTTTATAATATGTCATCTCTTTCTCTAATCTCAGCCACAAACAATCAATTTAATGGCTCTCTTCCTCCCAACATGTTCTACACCCTCCCCAATCTCCAAGAACTTTATATCGGTGGTAATCAAATCTCAGGTCCAATCCCACCTTCCATCACAAATGCATCTATCCTTACAGAACTTGACATTGGCGGAAACCATTTCATGGGACAAGTTCCAAGACTTGGGAAGTTACAAGATCTTCAATATCTATCTTTGACTTTTAACAATTTAGGTGACAATTCATCTAATGACTTAGAGTTTTTAGAATCATTGACAAACTGTAGTAAGTTGCAAATACTAGTAATATCCTACAATAATTTTGGAGGTCATTTGCCAAATTCCTTGGGCAATTTATCCACCCAACTAAGTGAATTATATCTTGGAGGCAATCAGATATCAGGAGAAATCCCTGAGGAATTAGGGAATCTTCTAATTGGATTAATTCTCTTGACGATGGAAAACAACAACATTGGTGGAATTATCCCAACTACTTTTGGTATGTTTCAAAAGATGCAATTGTTAGACTTAAGTGCAAACAAGTTGTTAGGAGAGATAGGAGCCTTTGTAGGAAACCTTAGTCAATTATTTTATTTGGCAATGGGAGCAAATATGTTTGAAAGGAATATTCCTCCAAGCATAGGAAACTGCCAAATGTTACAATATCTGAATCTTTCACAAAACAACCTTATAGGAACCATACCTATTGAGATTTTTAATCTTTCTTCCCTTACAAACTCCttggatttgtcacaaaattcattgagtggtagtatactagaagaagttggcaacctaaaaaatctcaattggctaggtatgtatgagaatcatttgtctggtgacattcctggaacaattggcgaatgcataatgttggagtacctctatttggatgggaattctttacaaggaaacataccatcctctttggcatcactcaaaagtcttcgatatttagacctgtcaagaaaccgcttgtctggatcaattcctaatgttctgcagaacatttttgtcttggaatacttgaatgtgtcttttaacatgttggatggtgatgtaccaactgaaggtgtctttcgaaatgcaagcacgtttgtggttaccggaaacaacaagctttgtggaggtatttcagaactgcatctaccaccatgcCCTGTCATCCAAGGCAAGAAACTAGCAAAACACCACAAGTTTAGGTTGATAGCAGTGATGGTTAGTGTGGTTGCTTTTCTTCTAATACTGTTAATAATTCTAACTATCTACTGGATGAGGAGGAGCAAGAAAGCATCTTTGGATTCACCAACATTTGACCTGCTGGctaaagtttcataccaaagcctacacaatggaactgatgggttctcaacagcaaacttgatagggtctggaaattttagctctgtctacaaaggaactcttgagttagaaaacaatgttgttgccataaaggtcctaaaccttaagagaaaaggagctcacaagagtttcatagcagaatgcaatgcgcttaaaaatattaaacatcgaaatcttgttcagattttgacatgttgttccagcacagattacaaaggtcaagaatttaaagctctaatttttgagtacatgaaaaatggaagcttggaacaatggctgcacccgagggcacttagtcaagagcatttgagagcattaaaccttgatcaaagattaaatatcatgattgatatcgcttctgcattaaattatcttcatcatgaatgtgagcaatcggtcgttcattgtgatttaaagccaagcaatgtcctcctcgatgatgacatgattgctcatgtgagtgactttggcatagcaagacttatctcaaccatcaatggtacaacttctaagaaaacaagtacaattggaataaagggaacagttggctatgctcctccagagtatggtgttggttctgaggtgtcaacttatggtgacgtgtacagctttggaattattttgttggaaatgcttactggaagaagacccacagacgaaatgtttgaagatggtcaaaatattcataactttgtTGCAATTTCATTTCCTGATAATCTTTTGCAGATTTTGGACCCACGGCTCATCCCTACAAATGAAGCAACATTGGAAGGAAACAATTGGAAGAAGTGCTTAATTTCACTTTTTAGGATTGGACTTGCTTGTTCTATGGAATCACCAAAAGAAAGAATGGATATGGTTGATCTAACTAGGGAACTTAATCAAATCAGAAAGGCCTTTCTTGTTGGTGTTAACCTTTGA 3045 0.2322 MKYFSFMLLAFSSIHAHLFSLFALNSLWSTFALGNETDQLALLKFRESISTDPYGIFLSWNNSAHFCNWHGIICNPTLQRVTELNLLGYKLKGTISPHVGNLSYMRSLDLGNNSFYGKIPQELGQLSRLQILYVDNNTLVGKIPTNLASCTRLKVLDLGGNNLIGKIPMKFGSLQKLQQLVLSKNRLIGGIPSFIGNFSSLTDLWVGDNNLEGHIPQEMCSLKSLTNVYVSNNKLSGTFPSCLYNMSSLSLISATNNQFNGSLPPNMFYTLPNLQELYIGGNQISGPIPPSITNASILTELDIGGNHFMGQVPRLGKLQDLQYLSLTFNNLGDNSSNDLEFLESLTNCSKLQILVISYNNFGGHLPNSLGNLSTQLSELYLGGNQISGEIPEELGNLLIGLILLTMENNNIGGIIPTTFGMFQKMQLLDLSANKLLGEIGAFVGNLSQLFYLAMGANMFERNIPPSIGNCQMLQYLNLSQNNLIGTIPIEIFNLSSLTNSLDLSQNSLSGSILEEVGNLKNLNWLGMYENHLSGDIPGTIGECIMLEYLYLDGNSLQGNIPSSLASLKSLRYLDLSRNRLSGSIPNVLQNIFVLEYLNVSFNMLDGDVPTEGVFRNASTFVVTGNNKLCGGISELHLPPCPVIQGKKLAKHHKFRLIAVMVSVVAFLLILLIILTIYWMRRSKKASLDSPTFDLLAKVSYQSLHNGTDGFSTANLIGSGNFSSVYKGTLELENNVVAIKVLNLKRKGAHKSFIAECNALKNIKHRNLVQILTCCSSTDYKGQEFKALIFEYMKNGSLEQWLHPRALSQEHLRALNLDQRLNIMIDIASALNYLHHECEQSVVHCDLKPSNVLLDDDMIAHVSDFGIARLISTINGTTSKKTSTIGIKGTVGYAPPEYGVGSEVSTYGDVYSFGIILLEMLTGRRPTDEMFEDGQNIHNFVAISFPDNLLQILDPRLIPTNEATLEGNNWKKCLISLFRIGLACSMESPKERMDMVDLTRELNQIRKAFLVGVNL 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00889 1014 Gene3D Phosphorylase Kinase; domain 1 693 791 - -
Gma03g00889 1014 PANTHER OS04G0122200 PROTEIN 23 1009 - -
Gma03g00889 1014 ProSiteProfiles Protein kinase domain profile. 710 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00889 1014 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Gma03g00889 1014 SMART LRR_typ_2 126 150 IPR003591 -
Gma03g00889 1014 SMART LRR_typ_2 567 590 IPR003591 -
Gma03g00889 1014 SMART LRR_typ_2 446 470 IPR003591 -
Gma03g00889 1014 SMART LRR_typ_2 222 246 IPR003591 -
Gma03g00889 1014 SMART LRR_typ_2 174 198 IPR003591 -
Gma03g00889 1014 SMART LRR_typ_2 471 494 IPR003591 -
Gma03g00889 1014 SMART LRR_typ_2 271 295 IPR003591 -
Gma03g00889 1014 SMART LRR_typ_2 374 397 IPR003591 -
Gma03g00889 1014 SMART LRR_typ_2 398 421 IPR003591 -
Gma03g00889 1014 ProSitePatterns Protein kinases ATP-binding region signature. 716 739 IPR017441 GO:0005524
Gma03g00889 1014 SUPERFAMILY L domain-like 398 630 - -
Gma03g00889 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Gma03g00889 1014 SUPERFAMILY Protein kinase-like (PK-like) 686 1001 IPR011009 -
Gma03g00889 1014 Gene3D Ribonuclease Inhibitor 34 315 IPR032675 -
Gma03g00889 1014 ProSiteProfiles Leucine-rich repeat profile. 569 591 IPR001611 GO:0005515
Gma03g00889 1014 Gene3D Transferase(Phosphotransferase) domain 1 792 1009 - -
Gma03g00889 1014 SUPERFAMILY L domain-like 36 331 - -
Gma03g00889 1014 Pfam Leucine Rich Repeat 273 293 IPR001611 GO:0005515
Gma03g00889 1014 PANTHER LRR RECEPTOR-LIKE KINASE 23 1009 - -
Gma03g00889 1014 SUPERFAMILY L domain-like 335 397 - -
Gma03g00889 1014 SMART serkin_6 710 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00889 1014 Pfam Protein kinase domain 712 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00889 1014 Pfam Leucine rich repeat 127 187 IPR001611 GO:0005515
Gma03g00889 1014 Pfam Leucine rich repeat 546 604 IPR001611 GO:0005515
Gma03g00889 1014 CDD STKc_IRAK 716 1004 - -
Gma03g00889 1014 Gene3D Ribonuclease Inhibitor 317 641 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00889 Gma-Chr3 31684446 31688113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00889 27 1009 Receptor kinase-like Gene Family AT3G47570 45.427 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gma03g00889 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00889 - - gmx:100778093 1944.09