Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00878 ATGGGTACGCTGGGTACTGGCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGAAATCTCCATGACCAACTCCATCATGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGTTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATTATCCATCAAAACATTAGCTCGAAATACATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTTGGCCTTGCCAGACTGATGAAACCAATTGATACTCATTTGAGTACTTTTGTAAATGAGGAGTTTGGTGATTTAGGTTATGTTGCTCCTGAGTACAAAGAACTTTGGTTGCCACACCTAAAGGGGATATTTACAGCCTTGGAACTATTCTTCTTGAGTTGGTGA 462 0.4177 MGTLGTGKHRNLVPLLGFCMAKRERLLVYKNMPNGNLHDQLHHADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHQNISSKYILLDADFEPKISDFGLARLMKPIDTHLSTFVNEEFGDLGYVAPEYKELWLPHLKGIFTALELFFLSW 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00878 153 PANTHER LRR RECEPTOR-LIKE KINASE 1 145 - -
Gma03g00878 153 SMART tyrkin_6 1 150 IPR020635 GO:0004713|GO:0006468
Gma03g00878 153 SUPERFAMILY Protein kinase-like (PK-like) 5 135 IPR011009 -
Gma03g00878 153 Gene3D Transferase(Phosphotransferase) domain 1 32 141 - -
Gma03g00878 153 Pfam Protein tyrosine and serine/threonine kinase 5 130 IPR001245 GO:0004672|GO:0006468
Gma03g00878 153 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00878 153 PANTHER RECEPTOR-LIKE PROTEIN 55 1 145 - -
Gma03g00878 153 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00878 Gma-Chr3 31514240 31514701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00878 1 141 Receptor kinase-like Gene Family AT1G27190 55.556 2.28e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gma03g00878 PK_Tyr_Ser-Thr 2.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00878 - - gsj:114405114 252.677