Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00876 ATGAAACTGAGTGATATCATGAAGGCTACTAACAACTTCAGTAATACCAATATGATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGATGATGGCACGACACTTATGGTTAAGAGATTACAAGAATCTCAGTACACTGAAAAACAATTTATGTCTGAAATGGGTACGCTGGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAGGGAGAGGCTTTTAGTCTATAAAAATATGCCAAATGGAATCCTCCATGACCAACTCCATCCTGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCTGCCAAAGGTTTAGCATGGCTTCATCATAGCTGCAATCCCTGTATTATCCACCGAAACATTAGCTCGAAGTGCATGTTGTTGGATGCAGATTTTGAGCCGAAAATTTCTGATTTTGGCCTTGCCAGACTGATGAACCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCCACAACTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTCTATAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAGAACACCATGATGCCATTGATGAATCACTAGTCAGCAAGGATGCTGATGGCGAGCTTTTCCAATTTCTAAAGGTTGTATGCAACTGTGTCTCACCAACGCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGAGATATTGGTACCTACTGATATTGGTGATACTGATAAAATGGAGGAATTTATTGTAGCTCGAGAAGGAAGTTATTGA 978 0.411 MKLSDIMKATNNFSNTNMIGTGRTGTVYKAVLDDGTTLMVKRLQESQYTEKQFMSEMGTLGTVKHRNLVPLLGFCMAKRERLLVYKNMPNGILHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPCIIHRNISSKCMLLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATTKGDIYSFGTVLLELVTGERPTNVYKAPETFKGNLVEWITELTSNAEHHDAIDESLVSKDADGELFQFLKVVCNCVSPTPKERPTMFEVYQLLRAIGGRYNFTTEDEILVPTDIGDTDKMEEFIVAREGSY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00876 325 ProSiteProfiles Protein kinase domain profile. 13 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00876 325 PANTHER RECEPTOR-LIKE PROTEIN 55 1 302 - -
Gma03g00876 325 CDD STKc_IRAK 19 287 - -
Gma03g00876 325 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Gma03g00876 325 Gene3D Transferase(Phosphotransferase) domain 1 88 303 - -
Gma03g00876 325 Pfam Protein tyrosine and serine/threonine kinase 16 286 IPR001245 GO:0004672|GO:0006468
Gma03g00876 325 SUPERFAMILY Protein kinase-like (PK-like) 4 287 IPR011009 -
Gma03g00876 325 PANTHER LRR RECEPTOR-LIKE KINASE 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00876 Gma-Chr3 31510804 31511781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00876 1 297 Receptor kinase-like Gene Family AT1G27190 52.349 1.72e-109 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gma03g00876 PK_Tyr_Ser-Thr 3.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00876 - - gsj:114405112 662.529