Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00860 ATGCACCACCTCTCCAAGCACCCCAACGTCATTCGCATCCACGACACCTACGAGGACACCGCCTCCGTGGAGGCTTGCCACTGGCTTGGGGTCATGCATAGGGTCCTCAAGCCTGAGAACTTTCTCTTTGATACTGTTGAGGAGGGTGCTAAGGTCAAAACTACTGATTTTGGGCTCTCCGTGTTTTATACGCCAAGTTTGGTTGCTCTCTCGTTAGATTTGGTTTTTGTGGAGGATGCCGAGGGAGAGGGCTTGGTTGTAGATTTTGGTGGAGGTGGGGATTCCGATGATGTCTTTGAGTTTTCCTTGGCGGAGGAGCTCGCTGATGTAGTCGACGGCGTGCTTGGCAATGGAGTCGGTGCCGAGGCCAAAGACCATGCCGGACTTGACATACTCGACGACCTTGTAGGCGGCAATTTTCTTGAGGTCGTCTTGGGTGAGGATGACGAAGGAGGGGGGGAGGGGtgttggatcaagtggcctcggaataattaa 495 0.5091 MHHLSKHPNVIRIHDTYEDTASVEACHWLGVMHRVLKPENFLFDTVEEGAKVKTTDFGLSVFYTPSLVALSLDLVFVEDAEGEGLVVDFGGGGDSDDVFEFSLAEELADVVDGVLGNGVGAEAKDHAGLDILDDLVGGNFLEVVLGEDDEGGGEGCWIKWPRNN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00860 164 PANTHER CDPK-RELATED KINASE 1 23 - -
Gma03g00860 164 PANTHER CDPK-RELATED KINASE 22 66 - -
Gma03g00860 164 Gene3D Transferase(Phosphotransferase) domain 1 16 90 - -
Gma03g00860 164 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 66 - -
Gma03g00860 164 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 23 - -
Gma03g00860 164 SUPERFAMILY Protein kinase-like (PK-like) 1 66 IPR011009 -
Gma03g00860 164 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00860 Gma-Chr3 31028105 31028599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00860 1 65 EF-hand Containing Proteins AT1G35670 46.602 5.20e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma03g00860 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00860 K13412 - gmx:100790443 104.76