Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00839 ATGTGCAATCCTTCAAAAATTAATAAGTCTCCCTTCAATGTGAATGTTATGGTTATTGATGAAGATGCTATTGCACTGCACACAACAATGGAAATACTAACAACCTTGAATTACAAAGCTGTAGGTACCACAAATTCCTTACTTGCTTTGGACCAACTTCATAAAAATCAAGGACATTTTCATCTCATTATAATGGAAGTTCATATGTCAGATCTTGATGGATTCAAACTAAAACAAATCATCGATGAAGAATTTGCAATACCAGTCATAATAGTTGTAATGAAAGGTAAGATGCCAACTATGACAAAAGTAGTTGGAGATATCATTGAAGATCACAAAGAATTGTGTTGTGCATCATTTTCAAAAGAAGATAATAGGGATGAGAAAAACAATGATGGCAAGGAACATTTATCGATGAATACTGTGAACGAGGATGAACCTACTACCTCTAAGAATACCAAATTTGTTTGGACAAAAGACCTTCGATATCGATTTGAGGAAGCCATTAATATTCTTGGCCCAAAGAATGTAATTCCAACAAAAATTGTTCAAGTCATGAATGTTGAAGGGTTAAAAAGGAGAAATGTGGCAAGTCATCTGCAGAAATATAAGCATTATTTAAGGCAGGTTGAAAGAATATTTGTTGCGATAATAAAGAAAGCAAATGAAGACAATGATATCTCTTTTACTAAGAAGGCATCAATACACTGGTCACTAGTGTTTAACCACATTAGACATTATTTGGAAAAAACAATAAAGCATAGTAAACGTAAAAGTTTGAGACATTTAGAGTCCGATGAAATATATATATCTCACTTAAAATCCAAACTATCCATTTTGTTGAGTAACCTTGACAAGTACAACAATAACAAACTAAATGCTAATGCTAATGATGCATTAAGTTCTTCAAATTTAGTGCAATGCAATGAGCCATCACAAAATCTCCTATGTAGCCCTTCTGAAATACTTAGATCAGGCCAAGCATCAAGTTCCAATGTTGTAGGGTTGTTGGAACCAAGTTCTTTAGGGTCTATTGTTGGTGAGGTTTATAGCAGAGATCAAACTTTGCCAACATCAATGGAAGACATTAACAATGTTGAAAATATTATGGGAGGAAACTTATTTCAACCCCGGCAACACCACCAGATTTATAATCAAGGATATCATCAAACTTTTGCAACTATGGACAATAATTTTGCTTCTCAAGGAACATTTGATGGGTTCCATTTCAAAGAAATTGATGATCCTTTCTCAATGGAAGACATTCTTAACAACTTCCACATGCAGCATGAAGAACCAGTCAATTCAGATAGCCATGCTAATTTGAACCAAAGTCATGATTACGTTCCGCTATTTGACCCACTCCTTAATGAGACAAGTTTGGAAGAAGACTTTGCTACCATAGAATCCATTTTGGATGATTTGGCGTAA 1431 0.3424 MCNPSKINKSPFNVNVMVIDEDAIALHTTMEILTTLNYKAVGTTNSLLALDQLHKNQGHFHLIIMEVHMSDLDGFKLKQIIDEEFAIPVIIVVMKGKMPTMTKVVGDIIEDHKELCCASFSKEDNRDEKNNDGKEHLSMNTVNEDEPTTSKNTKFVWTKDLRYRFEEAINILGPKNVIPTKIVQVMNVEGLKRRNVASHLQKYKHYLRQVERIFVAIIKKANEDNDISFTKKASIHWSLVFNHIRHYLEKTIKHSKRKSLRHLESDEIYISHLKSKLSILLSNLDKYNNNKLNANANDALSSSNLVQCNEPSQNLLCSPSEILRSGQASSSNVVGLLEPSSLGSIVGEVYSRDQTLPTSMEDINNVENIMGGNLFQPRQHHQIYNQGYHQTFATMDNNFASQGTFDGFHFKEIDDPFSMEDILNNFHMQHEEPVNSDSHANLNQSHDYVPLFDPLLNETSLEEDFATIESILDDLA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00839 476 Coils Coil 270 290 - -
Gma03g00839 476 SUPERFAMILY CheY-like 14 93 IPR011006 -
Gma03g00839 476 Gene3D - 13 120 - -
Gma03g00839 476 Gene3D - 148 211 - -
Gma03g00839 476 Pfam Response regulator receiver domain 16 105 IPR001789 GO:0000160
Gma03g00839 476 MobiDBLite consensus disorder prediction 123 141 - -
Gma03g00839 476 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 122 466 - -
Gma03g00839 476 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 153 204 IPR006447 GO:0003677
Gma03g00839 476 MobiDBLite consensus disorder prediction 123 149 - -
Gma03g00839 476 ProSiteProfiles Response regulatory domain profile. 15 137 IPR001789 GO:0000160
Gma03g00839 476 SUPERFAMILY Homeodomain-like 149 209 IPR009057 -
Gma03g00839 476 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 122 466 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00839 Gma-Chr3 30358552 30364807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00839 7 210 Response Regulator Gene Family AT4G31920 29.741 3.42e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma03g00839 Response_reg 1.6e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00839 - K14491 aprc:113850659 286.574