Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00837 ATGGAGTTTCAGTCTGAAGAAGCTGCCAAGAACTTCTATGAAGAATATGCGAGACGGGAAGGGTTCGTTGTGCGCCTTGATCGCTGCCATCGTTCTGAGGTTGACAAGCAAATCATTTCACGCCGTTTTTCGTGCAATAAGCAAGGTTTTCATGTGAGGGAGTCAAAGGATAGGATAATTCAACAACTCGCAAAGGAACTTGAGCACCAAGATCGATTATGTCAGCATTATCGCAGGCAGCTATTCTCCCTTCTGGAAACTGTTGACGAACAAACAAAATGTTTATCAACAAAAGTTGAACTTGTTGTTAACACCGTAAAAAAACTTGAGAATGAAGTACAAAAGCCTTTGATTTGA 357 0.4118 MEFQSEEAAKNFYEEYARREGFVVRLDRCHRSEVDKQIISRRFSCNKQGFHVRESKDRIIQQLAKELEHQDRLCQHYRRQLFSLLETVDEQTKCLSTKVELVVNTVKKLENEVQKPLI 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00837 118 Coils Coil 60 80 - -
Gma03g00837 118 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 1 53 - -
Gma03g00837 118 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 54 116 - -
Gma03g00837 118 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 53 - -
Gma03g00837 118 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 54 116 - -
Gma03g00837 118 Pfam FAR1 DNA-binding domain 11 57 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00837 Gma-Chr3 30328851 30330712 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma03g00837 FAR1 2.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00837 - - gmx:100802375 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01402 18 30890013 30900434 Gma03g00837 03 30328851 30330712 PCT
Gma08g03161 08 48412300 48415102 Gma03g00837 03 30328851 30330712 PCT
Gma03g00837 03 30328851 30330712 Gma18g01402 18 30890013 30900434 PCT
Gma03g00837 03 30328851 30330712 Gma08g03161 08 48412300 48415102 PCT