Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00810 ATGAGCGACAGCGACACCCGCCAAAACGACATCACAAAGCCACTCGATTTGGAAAACCTGAGAGTCGTCTCGGCCGTGGGGCGCGGCGCCAAGGGCGTCGTGTTCCTCGCGAGAACCGGTGACCGGTCGTCGGAAGAATGCGTGGCGCTAAAGGTGATACCGAAGGCGCTGATTCTTCAGAAGGCGAAACTAATAAACGACGTGGAGTACACCAGGGTGTCGTTTGAAGAGCAGGTGCTACGTCGTTTCGATCATCTGCTTCTGCCTAGGTTAAGAGGGGTTTTCGAAACTGAGAAAGTCGTTGGTTTCGGTATTGATTACTGCCACGGTGGCACGCTCCATTCGCTTAGGAAGAAACAGACCGAGAAAATGTTCTCCGATGACACGATCAGGTTTTATGCAGTGGAATTGGTTCTCGCATTGGAGTATTTGCACAATTTGGGAATAGTGTATAGAGATCTGAAGCCAGAGAATGTGATGATTCAAGATAACGGTCACATAATGTTGGTTGATTTTGACCTCTCCAAAAAGCTAAACCCTAAATCCCCTCACTCACTGAGTCAAAACTCTTCCCCGAGTCCCAACTCGAAGACAAAACAAACTAGGAAGCAACGATTAATGCGTTTCTACAGTTTCTGCAACTCGGGAATCTTGCCCTGCGACTCGGACTCGGAGCCCCCACTCAGCAGCGTCAACTCAGTGCGTCACACCGAGTCCGACTTGGTTGAAAAATCAAACTCGTTCGTAGGAACAGAAGAGTATGTGGCACCAGAAATAGTCTCCGGAAAAGGTCACGGCTTCAGCGTTGATTGGTGGTCGTACGGTGTTGTTTTGTATGAGATGTTGTATGGAACAACGCCGTTTAAGGGCTCGAATAGGAAAGAGACATTTTACCGAATCTTAATGAAGGAGCCGGAGTTAACGGGGGAGAAGACGGCGTTACGGGATTTGATTGGGAAATTGTTGGAGAAAAATCCTGACCGTCGGATTCAGGTTAATGAAATCAAGGGCCACAATTTTTTCAAGGGGGTTAAGTGGGACACGGTGTTGCACATTGCGAGGCCACCTTATATTCCCGAAAATGAGGTTGAGAACAAAGTGGGGTTCAGCAAAAGCGACGTGGAAGTGTTCGTGGACAACGTGTTTTTTCCAACGGGTGATGATGGAGGAGAGAAAACAAAAACGCTGTTGGataataataataataataataataataataataataataataataataataataataaAGTGTGGATTGACGAATTAAGTCATGTTCCCATTGGGAAGAAGAATGACGATTTTTTGATTTTTTGA 1317 0.4563 MSDSDTRQNDITKPLDLENLRVVSAVGRGAKGVVFLARTGDRSSEECVALKVIPKALILQKAKLINDVEYTRVSFEEQVLRRFDHLLLPRLRGVFETEKVVGFGIDYCHGGTLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHNLGIVYRDLKPENVMIQDNGHIMLVDFDLSKKLNPKSPHSLSQNSSPSPNSKTKQTRKQRLMRFYSFCNSGILPCDSDSEPPLSSVNSVRHTESDLVEKSNSFVGTEEYVAPEIVSGKGHGFSVDWWSYGVVLYEMLYGTTPFKGSNRKETFYRILMKEPELTGEKTALRDLIGKLLEKNPDRRIQVNEIKGHNFFKGVKWDTVLHIARPPYIPENEVENKVGFSKSDVEVFVDNVFFPTGDDGGEKTKTLLDNNNNNNNNNNNNNNNNNNKVWIDELSHVPIGKKNDDFLIF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00810 438 Gene3D Transferase(Phosphotransferase) domain 1 243 360 - -
Gma03g00810 438 SMART serkin_6 20 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00810 438 SUPERFAMILY Protein kinase-like (PK-like) 18 368 IPR011009 -
Gma03g00810 438 ProSiteProfiles Protein kinase domain profile. 20 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00810 438 Gene3D Phosphorylase Kinase; domain 1 20 111 - -
Gma03g00810 438 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 4 406 - -
Gma03g00810 438 MobiDBLite consensus disorder prediction 395 416 - -
Gma03g00810 438 Gene3D Transferase(Phosphotransferase) domain 1 112 181 - -
Gma03g00810 438 MobiDBLite consensus disorder prediction 180 200 - -
Gma03g00810 438 PANTHER FLIPPASE KINASE 1-RELATED 4 406 - -
Gma03g00810 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Gma03g00810 438 Pfam Protein kinase domain 244 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00810 438 Pfam Protein kinase domain 22 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00810 438 MobiDBLite consensus disorder prediction 389 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00810 Gma-Chr3 29557477 29560564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00810 1 438 AGC Kinase Gene Family AT3G25250 54.628 9.34e-149 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma03g00810 Pkinase 4.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00810 K20714 - gmx:100785773 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03187 08 48634622 48636655 Gma03g00810 03 29557477 29560564 PCT
Gma03g00810 03 29557477 29560564 Gma08g03187 08 48634622 48636655 PCT