Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00805 ATGGAATTCGCGTcttcttcatcacccttctcaaaatccaaaacccaatggatgtacgatgtgttcatcaattttaggggagaagacatccgtaagaatttcgtttctcatcttcattctgcccttttacatgctgaagtcaaaactttccttgacgacgagaatctactgaagggaatgaagtcggaagaactgatccgagcaatagaagggtctcagattgcagtagttgttttctccaaaacctataccgaatctagtttgtgtcttcgtgagcttgaaaaaatcattgaaagccacgaaactcgtggccaaagagttttacccatattctacgaagttgatccttccgatgtacgtcagcagaagggtgattttggagaagccttgaaagcagctgcacaaaaaggattttcaggagaacatctggaatctgggttgtcgaggtggagccaagccatcacaaaagctgcaaacttgcctggTTGGGATGAGAGCAATCACGAGAATGATGCTGAACTAGTGGAGGGAATTATTAACTTCGTTCTTACTAAACTAGACTACGGCTTGTCTATTACTAAATTTcctgttggattagaatcccgcgtggaaaaagttattggatttattgaaaatcagtccaccaaagtctgtaaggtagggatatgggggatgggaggattgggtaaaactaccattgccaaaggcatctacaatcgaattcatcgttcattcatagataaaagtttcattgaagatgttagagaagtttgtgaaacggatggtagaggggttactcttttacaagaacaacttctttcagatgtgctaaaaacaaaggtcgagataacaagtgtagggaagggaagaactatgatcaaggggagactttgtggaaaaaggttgctcattgtacttgatgatgtgaataagtttggccaattaaaagatctgtgtggaaatcatgaatggtttggtcaaggaagtgtattaatcattacaactagagatctacacctactggacctacttaaagttgattatgtttatgaaattgaggaaatggacgaaaatgagtcccttcagctttttagttggcatgcctttggacaaccaaaaccaagagaagacttcaatgaacttgcaagagatgtagttgcttattgtggaggattaccattagctcttgaagtccttggttctcatttaattagtaggacagagacagagtgggaaagtgcattgtcaaggttaaaaatgactcccaatgatcaaattcagcaaaaattaagaataagttttgatgatttatatgatcatatggaaaaacatatatttcttgacatatgttgtttctttattggtaaagacaaggtctatgttacacacatactaaatggatgtggactacatgctgatattgggttaacagttctcatagagcgtagccttgtaaaagttgaaaagaataacaaacttgcaatgcataatttgctacgagaaatgggaagagagattattcgtgaaggttcaagaaagaaacttgggaagcgcagtcgtttgtggtttgatgaggatgtagttgaaattttgacagagaaaactgggacagaggctattgagggattggctctgaaattgcattcaaacaaaagatattgcttcaaagctgatgcttttgcagaaatgaagagattgagactgttgcaacttgataatgtagaactcactggagattataggtatctttctaagcaactgagatggatctcttggaaaggattttctctaaaatacatacctaagagcttttATCTGGAAGGTGCAATTGCAATTGATTTAAAACACAGTAGTCTTAGACTAGTCTGGAAAGAACCCCAGGTTTTGCAGTGGCtaaaattcctcaatcttagtcactccaagtacttgaaagaaacccccgacttttcaaaattaccaaatcttgaaaagctcattctcacagattgttcaagtttgctcaaggtacaccaatccattggagatctccagaatcttctatttataaatttgaaggactgtaaaagcctaagtaatctccccagatcgatatataaattgaaatctttgagaactctcatcctatctggttgttcgaagattgacacattggatgaagatataatgcagatggaatccttgacaacactaattgctgaaaatactgctgtgaaacaagtgccctttccaatagtaagttcgaaAGGCATTGGGTATATATCCATTTATGGATATGAAGGATTTTCACATCATGTTTATCTTTCTATCATGCGGTCTTGGATGCTACCAAAAATGAATCCCCTATCTTGTATTCGCTCGTTTAGTGGCACTTCATCATCTCCAATTCCCATGGACATGCAGAATAAAAATTTGAGTGATCTAGCACCACCAATTTCAAATTTTCGAAGTGTTGTGGTGCAATGTGAGACAGAGATTCAACTATTTAACCAAATAAGAACAATTCTAGATGATGTGTATGGTGCAAATTTTAGTGAATTAGAAATAACATCATATACATCCCAAAGTTCAAATCATTCCGTGAAGTCTTATTTGATTGGCATTGGAGATTTTGAGCAAGTCTTCATTTCTCTCAGCAACAGCATATCTGAGGGATTGGCAACCTGTGAGTCTTCTGATGTTTTTCTCCCTGGTGACTATTATCCGTATTGGTTGGCTCATACAGGTGAGGGACAGTCAGTGTATTTCACTGTGCCCGAGGATTGTCGCATAAAGGGTGTAACTTTGTGTGTTGTTTATTTATCAACCCTCGAAAACATGGCTACTGAAGTTCTTATTGGTGTTTTAATGGTTAATTACACAAAGTGCGCCATCCAGTTTCACAAGCGAGAGACTTTATTTTCCTTTAATGATGTAGATTGGCAGGGCATAATATCATTTTTTGGACCTGGAGACAAGGTGGAGATTTTTGTTATTTTTGGGAATGGATTGGCGATCAAGAAGACAGCTGTGTATTTAATTTGTGATGAATCCATTGAAATGGAAATGACAAAGattgaaatggacatggagccttcacatttgtattgtgatgatgtcattgaaaaggacacggagccttctaatttgtattgtgatgatgtcattgaaaaggacatggagccttctCGTGAGCAAAAGAAAGTGACAAAGAATGAGAGATTAGTACGACTCAACAAAATTTTAAAAAAATATTTTCCAAGAAAGTAG 3246 0.1248 MEFASSSSPFSKSKTQWMYDVFINFRGEDIRKNFVSHLHSALLHAEVKTFLDDENLLKGMKSEELIRAIEGSQIAVVVFSKTYTESSLCLRELEKIIESHETRGQRVLPIFYEVDPSDVRQQKGDFGEALKAAAQKGFSGEHLESGLSRWSQAITKAANLPGWDESNHENDAELVEGIINFVLTKLDYGLSITKFPVGLESRVEKVIGFIENQSTKVCKVGIWGMGGLGKTTIAKGIYNRIHRSFIDKSFIEDVREVCETDGRGVTLLQEQLLSDVLKTKVEITSVGKGRTMIKGRLCGKRLLIVLDDVNKFGQLKDLCGNHEWFGQGSVLIITTRDLHLLDLLKVDYVYEIEEMDENESLQLFSWHAFGQPKPREDFNELARDVVAYCGGLPLALEVLGSHLISRTETEWESALSRLKMTPNDQIQQKLRISFDDLYDHMEKHIFLDICCFFIGKDKVYVTHILNGCGLHADIGLTVLIERSLVKVEKNNKLAMHNLLREMGREIIREGSRKKLGKRSRLWFDEDVVEILTEKTGTEAIEGLALKLHSNKRYCFKADAFAEMKRLRLLQLDNVELTGDYRYLSKQLRWISWKGFSLKYIPKSFYLEGAIAIDLKHSSLRLVWKEPQVLQWLKFLNLSHSKYLKETPDFSKLPNLEKLILTDCSSLLKVHQSIGDLQNLLFINLKDCKSLSNLPRSIYKLKSLRTLILSGCSKIDTLDEDIMQMESLTTLIAENTAVKQVPFPIVSSKGIGYISIYGYEGFSHHVYLSIMRSWMLPKMNPLSCIRSFSGTSSSPIPMDMQNKNLSDLAPPISNFRSVVVQCETEIQLFNQIRTILDDVYGANFSELEITSYTSQSSNHSVKSYLIGIGDFEQVFISLSNSISEGLATCESSDVFLPGDYYPYWLAHTGEGQSVYFTVPEDCRIKGVTLCVVYLSTLENMATEVLIGVLMVNYTKCAIQFHKRETLFSFNDVDWQGIISFFGPGDKVEIFVIFGNGLAIKKTAVYLICDESIEMEMTKIEMDMEPSHLYCDDVIEKDTEPSNLYCDDVIEKDMEPSREQKKVTKNERLVRLNKILKKYFPRK 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00805 1081 Gene3D - 354 438 IPR042197 -
Gma03g00805 1081 PRINTS Disease resistance protein signature 219 234 - -
Gma03g00805 1081 PRINTS Disease resistance protein signature 296 310 - -
Gma03g00805 1081 PRINTS Disease resistance protein signature 389 403 - -
Gma03g00805 1081 PRINTS Disease resistance protein signature 698 714 - -
Gma03g00805 1081 Gene3D - 11 188 IPR035897 -
Gma03g00805 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 163 IPR035897 -
Gma03g00805 1081 Pfam NB-ARC domain 200 436 IPR002182 GO:0043531
Gma03g00805 1081 SMART till_3 18 160 IPR000157 GO:0007165
Gma03g00805 1081 Gene3D Ribonuclease Inhibitor 537 749 IPR032675 -
Gma03g00805 1081 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1007 - -
Gma03g00805 1081 Pfam TIR domain 19 185 IPR000157 GO:0007165
Gma03g00805 1081 Gene3D - 190 349 IPR027417 -
Gma03g00805 1081 SUPERFAMILY L domain-like 545 777 - -
Gma03g00805 1081 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Gma03g00805 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1007 IPR044974 GO:0006952
Gma03g00805 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 449 IPR027417 -
Gma03g00805 1081 ProSiteProfiles TIR domain profile. 17 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00805 Gma-Chr3 29369410 29374187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00805 8 744 WRKY Transcription Factor Family AT4G12020 29.801 2.85e-85 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00805 - - gmx:100815297 1427.92