Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00802 ATGATTTCAGTTAGTTCCGGTACTCAACTGCCCCAAACTATTCCCAAAACCACGTTAAACTTGATTAAGAATTATGCAATACTCTTTCTAAAATTGATGAGTGGTCAAGAGGATTATTCCTTTGCGGAGTTATTTCCAATGGCTATTATTGGGGTTATTGGAGGCCTACTAGGCTCTTTATTCAACCAGCTTACACTTTATATTATCACTTGGCGTCGAAATCATCTTCACAAGAAAGGGAACATGGTCAAGATGTTGGCTGAGCTACTAAGAAGAGAGAAGCATGCAAAGATTAAACCGGATCCTGATATTGATGCCTATATGAAGGATGTGAAGAACGAAGCAGAAGCATACATGCTTAAGGAGTTGTCTCTGTTGAAATGGCAAGAGAAAGCTACAAAGTTCGCCCTTGATGATACAGGTGGAAAAATGGATGAGTTACAAGGGAATGTTGCTACTCTAGAAGAAAATCTCAAGGCAGAAAGAACATGGTGGTATCTTATTCCAGGGATAAAATCCAAGATAGTAAAACAAACTCTCAAAGAGTTTGAAACTACGCACAACAACTATATGAAAAGACAAGAGGAGTTAGATAATGATATGAGGAAGTACAAGGAAGAGTTCAAAGAGTTTTAG 636 0.3805 MISVSSGTQLPQTIPKTTLNLIKNYAILFLKLMSGQEDYSFAELFPMAIIGVIGGLLGSLFNQLTLYIITWRRNHLHKKGNMVKMLAELLRREKHAKIKPDPDIDAYMKDVKNEAEAYMLKELSLLKWQEKATKFALDDTGGKMDELQGNVATLEENLKAERTWWYLIPGIKSKIVKQTLKEFETTHNNYMKRQEELDNDMRKYKEEFKEF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00802 211 Coils Coil 180 211 - -
Gma03g00802 211 Gene3D Clc chloride channel 13 90 - -
Gma03g00802 211 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 37 87 - -
Gma03g00802 211 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 37 87 - -
Gma03g00802 211 Coils Coil 137 157 - -
Gma03g00802 211 Pfam Voltage gated chloride channel 35 85 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma03g00802 211 SUPERFAMILY Clc chloride channel 33 78 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00802 Gma-Chr3 29224280 29227013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00802 35 86 Ion Channels AT5G26240 75.000 3.63e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00802 K06675 - gmx:100781330 166.007