Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00800 ATGGAATTCGCGTcttcttcatcatccttcccaaaatccaaatcccgatggacatacgatgtgttcatcaattttagcggagaagatctccgtaagaatttcatttctcatctctcttatgccctttcaaaagctggaatcaacactgtccttgacggccaacaaatggagctggaagaactaatgaaaccagaaaagtctcagatctcaatagttgttttctccaaaagttatactgaatctacttggtgtcttgatgagcttgcaaaaatcattgaaatccatgaaacttatggccaaagagttgtggtcgtattttacgaaattgacccatcccatgtacgtgatcagaagggagattttggaaaagggttgaaagcagctgcacgaaaaagattttcagaagaacatctggaatctgggttgtcgaggtggagccaagcactcactaaagctgcaaatttctctggTTTGGATTTGAAGAATTGCAGGGATGAAGCTGAACTGGTGAAACAAATTGTTAACGATGTTCTTAATAAACTGGAATATGAAGTCCGGTCTgttaccaaatttcctgttggattagaatcccgtgtgcaagaagtgattagatttattgaaaatcaatcaaccaaagtttgtatcatagggatatggggaatgggaggagtgggtaaaactaccacagccaaagccatctacagtcaaattcatcgtagattcatggataaaagtttcatcgaaagtattagatcagtttgtgaaacagatagtaaaggacatgttcatttacaagaacaactgctctccgatgtcctaaacacaaaggtcaagatacatagcattgggatgggaacaactataatagagaaaagactttcaggaaaaagggtgctcattgtacttgatgatgtgaatgagattggccaattagaagatttatgtggaaattgtgaatggttcggtcaaggatctgtaataatcattacaacaagagatgtaggcctactgaacctatttaaagttgattatgtttataaaatggaggaaatggacgaaaacgagtctcttgagcttttttgtttgcacgcttttggagaaccaaatccaagagaagacttcaatgaacttgcaagaaatgtagttgcttattgtggaggactaccactagctcttaaagtccttggatctaacttacgtggtaggagtaatgaagaatgggaaagtgtgttgtcaaaactaaagcaaattcccaataatgaagttcaagaaatattaaaaataagctttgatggtttacgtgatcacatggaaaaggatatattttttgatgtatgttgtttctttattggtaaagacatagcctatgttacagatatactaaacggctgtggactacatgctgatattggaatacctgttcttatagagcgtagcctcataaaaattgaaaagaacaacaaacttggaatgcatcctttgcttcaacaaatgggaagagagataattcgtggaagttcaataaaggaaccttttattgaacctgggaagcaaagtcgattgtggtttcatgaggatgtacttgatgtattgataaagaatactgggaccatagctattgagggattggctctgcaattgcatttatccatcagagattgcttcaaagctgaagcttttcaggaaatgaaaagattgagactgttgcgacttgatcatgtacaactcaccggagattatgggtatctttctaagcaactgagatggatctattggaaaggatttcctctaaattacatacctaacaacttttATCTGGAAGGTGTAATTGCTATTGATTTAAAGCACAGTAATCTTAAACTACTATGGAAAAAAACCCAGGTTTTGCAGTGGCtaaaaatcctcaatcttagtcattccaagtatttgacagaaacccctgacttttcaggactaccgagtcttgaaaaactcattctcaaagattgtccaaggttgcgcaaggtacaccaatccattggagatctccacaatctacttttgataaatttgaaggactgtacaagccttagcaatctcccaagagagatatataaattgaaatctgtggaaactcttatcctatctggttgtttgaatattgacatattggaagaagatatagtgcagatggaatccttaacaactctaatttccgacaatactgctgtgaaacaagtgcccttttcaatagtaaACTCAAAAAGCATTGGATATATATCCATATGTGGATTTAAAGGATTGTCACATGATGTTTTGCATTCTATCATTCTGTCTTGGATGCCTACGACAATGAATCCTCTATCTCATATTCGTTTGTTTTCTGGTACTTCATCAGTTTCCAAGCATCTGCTGCATAATGATTTGGGTGATCTACCACCAATGCTTAGCAGCATTTCAAACCTTCGAAGCTTTTTGGTGCAATGTGACACAGAGTTCCAGTTAGATAAACAAGTAAAGGCAATGCATATCGTTTATGGTGTTAATTATACAGAATTAGAAAATTCAAAGAATTACTTGAGGTCTGATTTTATTGGAATTGACAGATACCAAGTCTTCAATACTCTCACTGATGATAGCATATCTGAGGAAATGGGAACCATTGAGGCTTGGCGGGATGTTTTGCTCCCAGGTGACAATCATCCTTACTGGTTGACCCATACAGGTGAGGGACATTCAGTGTGCTTTACTGTGCCTGAGGATTGTCCCTTGAAGGGAATGGCTTTGTGTGTTGGTTATTCATCAACCCCTAAAATCATGGCAACCAAATGTCTTATTAGTGTCGTAATGGTTAATTACACAAAGTGCACCATCCAGATATTCAAGCGAGACACAGTAATTTCCTTTAATTATGAAGATTGGCAGGGCATAGTATCACATTTTGGTCCTGGAGACAAGGTGAAGATTTTTGTGCTTTTTGATCATGGATTAGTTGTCAAGAAGACAGCTGTCTATCTAGCGTGTGATAAATCAATTGGCAAGGAAATGGAGCCTCCGCCTTCTGCCGAAAAGTTCAGAAATATGTTAGTGGCAAAAGAACTGGTAACTGGATTAGTACCATTTGGCATGGTAATTGCCGACAAGCTCAAAGTAGTGGCAGTAGTGGCAGTACTGaagggacacatgaagaagaattgtcccggattccagaaatggcttgagaagaaagggtatgcaaaacctaaggaaactagtgggaagtga 3243 0.1332 MEFASSSSSFPKSKSRWTYDVFINFSGEDLRKNFISHLSYALSKAGINTVLDGQQMELEELMKPEKSQISIVVFSKSYTESTWCLDELAKIIEIHETYGQRVVVVFYEIDPSHVRDQKGDFGKGLKAAARKRFSEEHLESGLSRWSQALTKAANFSGLDLKNCRDEAELVKQIVNDVLNKLEYEVRSVTKFPVGLESRVQEVIRFIENQSTKVCIIGIWGMGGVGKTTTAKAIYSQIHRRFMDKSFIESIRSVCETDSKGHVHLQEQLLSDVLNTKVKIHSIGMGTTIIEKRLSGKRVLIVLDDVNEIGQLEDLCGNCEWFGQGSVIIITTRDVGLLNLFKVDYVYKMEEMDENESLELFCLHAFGEPNPREDFNELARNVVAYCGGLPLALKVLGSNLRGRSNEEWESVLSKLKQIPNNEVQEILKISFDGLRDHMEKDIFFDVCCFFIGKDIAYVTDILNGCGLHADIGIPVLIERSLIKIEKNNKLGMHPLLQQMGREIIRGSSIKEPFIEPGKQSRLWFHEDVLDVLIKNTGTIAIEGLALQLHLSIRDCFKAEAFQEMKRLRLLRLDHVQLTGDYGYLSKQLRWIYWKGFPLNYIPNNFYLEGVIAIDLKHSNLKLLWKKTQVLQWLKILNLSHSKYLTETPDFSGLPSLEKLILKDCPRLRKVHQSIGDLHNLLLINLKDCTSLSNLPREIYKLKSVETLILSGCLNIDILEEDIVQMESLTTLISDNTAVKQVPFSIVNSKSIGYISICGFKGLSHDVLHSIILSWMPTTMNPLSHIRLFSGTSSVSKHLLHNDLGDLPPMLSSISNLRSFLVQCDTEFQLDKQVKAMHIVYGVNYTELENSKNYLRSDFIGIDRYQVFNTLTDDSISEEMGTIEAWRDVLLPGDNHPYWLTHTGEGHSVCFTVPEDCPLKGMALCVGYSSTPKIMATKCLISVVMVNYTKCTIQIFKRDTVISFNYEDWQGIVSHFGPGDKVKIFVLFDHGLVVKKTAVYLACDKSIGKEMEPPPSAEKFRNMLVAKELVTGLVPFGMVIADKLKVVAVVAVLKGHMKKNCPGFQKWLEKKGYAKPKETSGK 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00800 1080 Gene3D - 181 344 IPR027417 -
Gma03g00800 1080 SUPERFAMILY "Winged helix" DNA-binding domain 420 531 IPR036390 -
Gma03g00800 1080 Pfam TIR domain 19 188 IPR000157 GO:0007165
Gma03g00800 1080 SUPERFAMILY L domain-like 552 818 - -
Gma03g00800 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 443 IPR027417 -
Gma03g00800 1080 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1001 IPR044974 GO:0006952
Gma03g00800 1080 PRINTS Disease resistance protein signature 385 399 - -
Gma03g00800 1080 PRINTS Disease resistance protein signature 292 306 - -
Gma03g00800 1080 PRINTS Disease resistance protein signature 215 230 - -
Gma03g00800 1080 PRINTS Disease resistance protein signature 627 643 - -
Gma03g00800 1080 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1001 - -
Gma03g00800 1080 Gene3D - 350 434 IPR042197 -
Gma03g00800 1080 SMART till_3 18 155 IPR000157 GO:0007165
Gma03g00800 1080 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
Gma03g00800 1080 Gene3D - 12 180 IPR035897 -
Gma03g00800 1080 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 157 IPR035897 -
Gma03g00800 1080 Pfam NB-ARC domain 197 428 IPR002182 GO:0043531
Gma03g00800 1080 Gene3D Ribonuclease Inhibitor 544 866 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00800 Gma-Chr3 29204216 29209888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00800 10 819 WRKY Transcription Factor Family AT4G12020 29.586 1.31e-84 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00800 - - gmx:100779338 2095.47