Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00791 ATGGGTATCTCCAGAGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCCTGGAGGAAAAAGAGAAAGTATGAGCTTGGTCGCCAGCCTGCTAACACTAAGCTGTCAAGCAACAAGACAGTCAGGAGGATCCGTGTTAGAGGTGGAAATGTGAAATGGAGGGCATTGAGATTGGATACTGGAAATTACTCCTGGGGAAGTGAAGCTGTAACTCGCAAGACTCGTGTACTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGTACTCAGACTCTTGTCAAAAGTGCTATCGTTCAGGTTGATGCTGCTCCATTCAAACAGTGGTATCTTCAGCACTATGGTGTTGAGATTGGTAGGAAAAAGAAGACAGCTGCCAAGAAGGAAACTGCAGAGGAGGGTGGTGATGCTGCTGCAGCTGCAGAAGAAGCCAAAAAGAGTAACCATGTGCAGAGAAAATTGGAGAAGCGCCAGAAAGATCGAAAGCTTGATGCTCACATTGAGGAGCAGTTTGGTGGTGGGCGTTTGCTTGCTTGCATTTCCTCTAGACCTGGTCAATGTGGCAGAGCTGATGGCTACATTCTGGAAGGTAAGGAGTTGGAGTTTTACATGAAAAAACTCCAGAAGAAGAAGGGAAAGGGTGCTGCTTGA 663 0.4706 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKETAEEGGDAAAAAEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00791 220 PANTHER 40S RIBOSOMAL PROTEIN S8 1 220 - -
Gma03g00791 220 CDD Ribosomal_S8e_like 5 199 - -
Gma03g00791 220 Pfam Ribosomal protein S8e 5 199 IPR022309 -
Gma03g00791 220 Gene3D Ribosomal protein S8e, subdomain 109 178 IPR042563 -
Gma03g00791 220 Gene3D - 27 215 - -
Gma03g00791 220 MobiDBLite consensus disorder prediction 131 165 - -
Gma03g00791 220 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Gma03g00791 220 MobiDBLite consensus disorder prediction 11 26 - -
Gma03g00791 220 MobiDBLite consensus disorder prediction 1 39 - -
Gma03g00791 220 TIGRFAM eS8: ribosomal protein eS8 1 201 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma03g00791 220 PANTHER 40S RIBOSOMAL PROTEIN S8 1 220 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00791 Gma-Chr3 28752411 28755515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00791 1 208 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.173 1.42e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00791 K02995 - gmx:100794937 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00791 03 28752411 28755515 Gma16g00784 16 11198100 11200643 GST