Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00789 ATGGACGAGGACTTCGACATGCCGACGGCGGAGGCAATGGGCGAGGACTTCGACTTCGCCGGCGCCACCGGCGGCGACCTCGACGGCAGCAGCAGCAACCCCATCTTGAAGGTCGGCGAGGAGAAGGAGATTGGAAAAGAGGGTTTGAAGAAGAAACTACTTAAAGAAGGTGAAGGATGGGACACTCCTGAAGTTGGTGACGAAGTTCAAGTTCACTATACTGGGACGTTGCTTGATGGCACTAAGTTTGATTCCAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGGGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACGATGAAGAAAGGTGAAAATTCCCTTTTCACCATCCCGGCTGAGCTAGCTTATGGTGAAACTGGTTCTCCTCCAACAATTCCCCCTAATGCAACTCTTCAATTTGATGTGGAGCTGTTGTCTTGGACTAGTGTGAAAGACATATGTAAGGATGGAGGTTTATTTAAGAAGATACTTACCAAGGGGGAGAAATGGGAGAACCCAAAGGATCCTGATGAAGTTTTAGTCAAGTATGAAGCATGCCTTGAAGATGGAACTCTTGTGGCAAAATCTGATGGAGTGGAGTTCACAGTCAATGATGGTTATTTTTGTCCTGCTTTGTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGCTTCTGACAGTGAAGCCACAATATGGATTTGGTGAGAAGGGTAAGCCAGCACATGATGAAGAAGGTGCAGTTCCACCAAATGCAACATTGCAGATTACTCTTGAGTTAGTTTCTTGGAAGACTGTCTCAGAAGTAACGGAGGACAAGAAGATCATTAAGAAGATCCTCAAGGAAGGGGAAGGATATGAGCGTCCAAATGAGGGAGCCATTGTGAAATTGAAAGTAATTGGTAAGCTGCAAGATGGTACTTTGTTTTTGAAAAAGGGCCATGACGATGAAGGAGAGCTGTTTGAATTCAAAACTGATGAGGAGCAAGTAATTGATGGGCTTGACAGAGCTGTGTTGACTATGAAGAAGGGTGAGATAGCATTGTTGATTATAGGACCTGAATATGCTTTTGGTTCATCAGAGTCTCAGCTGGAACTTGCAGTGGTTCCACCTAACTCCACAGTATATTACGAGGTTGAGCTAGTATCATTTGAGAAGGAGAAGGAATCCTGGGACATGGACACGCCAGAGAAGATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGAAATGCATTATTTAAAGCTGGTAAATATGCAAGAGCTTCTAAAAGATACGAGAAGGCTGTAAAGTTCATAGAGTACGATACTGCCTTTAGCGAAGAGGAGAAGAAGAGCTCCAAAGCCTTGAAGGTTGCCTGTAATCTAAACAATGCAGCATGCAAGTTGAAATTAAAAGATTATAAACAAGCAGAGAAATTGTGCACAAAGGTACTGGACCTTGAGAGTACTAATGTGAAGGCTCTCTATAGAAGGGCCCAGGCATATATCCAGTTGGCTGATTTAGACTTGGCCGAATTTGATATTAAGAAAGCGCTTGAGATTGACCCTAACAACAGGGATGTCAAGCTTGAGTACAAGACTTTGAAGGAAAAGATGAAGGAGTACAACAAAAAAGAGGCAAAATTTTATGGAAATATGTTCAACAAACTGCACAAGCTAGATTCTCTTGACAGTAATAAACCAGCGTCGAAGGATGCCCAACCGATGAATATCGACAGCAAGGCATAA 1749 0.4334 MDEDFDMPTAEAMGEDFDFAGATGGDLDGSSSNPILKVGEEKEIGKEGLKKKLLKEGEGWDTPEVGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQGQVIKGWDQGIITMKKGENSLFTIPAELAYGETGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKILTKGEKWENPKDPDEVLVKYEACLEDGTLVAKSDGVEFTVNDGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGEKGKPAHDEEGAVPPNATLQITLELVSWKTVSEVTEDKKIIKKILKEGEGYERPNEGAIVKLKVIGKLQDGTLFLKKGHDDEGELFEFKTDEEQVIDGLDRAVLTMKKGEIALLIIGPEYAFGSSESQLELAVVPPNSTVYYEVELVSFEKEKESWDMDTPEKIEAAGKKKEEGNALFKAGKYARASKRYEKAVKFIEYDTAFSEEEKKSSKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLESTNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPNNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFNKLHKLDSLDSNKPASKDAQPMNIDSKA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00789 582 Gene3D - 39 157 IPR046357 GO:0003755
Gma03g00789 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 299 392 IPR001179 GO:0003755
Gma03g00789 582 MobiDBLite consensus disorder prediction 562 582 - -
Gma03g00789 582 SUPERFAMILY FKBP-like 275 409 - -
Gma03g00789 582 SMART tpr_5 458 491 IPR019734 GO:0005515
Gma03g00789 582 SMART tpr_5 409 442 IPR019734 GO:0005515
Gma03g00789 582 SMART tpr_5 492 525 IPR019734 GO:0005515
Gma03g00789 582 PANTHER PEPTIDYLPROLYL ISOMERASE 1 277 - -
Gma03g00789 582 PANTHER PEPTIDYLPROLYL ISOMERASE 280 391 - -
Gma03g00789 582 PANTHER PEPTIDYLPROLYL ISOMERASE 391 562 - -
Gma03g00789 582 SUPERFAMILY TPR-like 398 557 IPR011990 GO:0005515
Gma03g00789 582 Coils Coil 525 545 - -
Gma03g00789 582 SUPERFAMILY FKBP-like 158 275 - -
Gma03g00789 582 MobiDBLite consensus disorder prediction 17 40 - -
Gma03g00789 582 Gene3D - 158 271 IPR046357 GO:0003755
Gma03g00789 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 66 154 IPR001179 GO:0003755
Gma03g00789 582 Pfam Tetratricopeptide repeat 492 525 IPR001440 GO:0005515
Gma03g00789 582 Gene3D - 272 393 IPR046357 GO:0003755
Gma03g00789 582 ProSiteProfiles TPR repeat profile. 492 525 IPR019734 GO:0005515
Gma03g00789 582 SUPERFAMILY FKBP-like 43 158 - -
Gma03g00789 582 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 182 271 IPR001179 GO:0003755
Gma03g00789 582 Gene3D Tetratricopeptide repeat domain 395 552 IPR011990 GO:0005515
Gma03g00789 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 177 268 IPR001179 GO:0003755
Gma03g00789 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 62 151 IPR001179 GO:0003755
Gma03g00789 582 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 389 IPR001179 GO:0003755
Gma03g00789 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 277 - -
Gma03g00789 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 280 391 - -
Gma03g00789 582 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 391 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00789 Gma-Chr3 28711165 28716630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00789 35 566 Calmodulin-binding Proteins AT3G25230 82.331 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00789 K09571 - gmx:100794411 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00789 03 28711165 28716630 Gma16g00785 16 11270489 11275413 GST