Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00788 ATGAACGCTCTTCCCATTCTTCTCTTCTTCCTCTTCGTTTCGGCATTAGTTTATGCGAAGAAAACTGGCGATGTGACGGAGTTGCAAATTGGCGTGAAGCATAAACCAGCATCATGTGAAGTTCTGGCACACAAAGGTGACAGAGTCAAAGTACACTATCGGGGAAAACTCACTGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAATCCAATTGAATTTGAGCTTGGTACTGGTCAAGTGATCAAAGGTTGGGACCAGGGATTATTGGGAATGTGTCTTGGTGAGAAGCGGAAGCTGAAAATACCAGCGAAACTTGGCTATGGAGATCAGGGTTCCCCACCCACTATTCCAGGTGGTGCAACACTCATATTTGACACTGAGCTTGTGGGAGTGAACGACAAAAGTTTAGGCGAAGAAAAAGAAAACTCCGAACTGTAG 444 0.4414 MNALPILLFFLFVSALVYAKKTGDVTELQIGVKHKPASCEVLAHKGDRVKVHYRGKLTDGTVFDSSFERNNPIEFELGTGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGDQGSPPTIPGGATLIFDTELVGVNDKSLGEEKENSEL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00788 147 Gene3D - 17 146 IPR046357 GO:0003755
Gma03g00788 147 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 6 144 - -
Gma03g00788 147 PANTHER - 6 144 IPR044609 GO:0000413|GO:0003755|GO:0061077
Gma03g00788 147 SUPERFAMILY FKBP-like 28 137 - -
Gma03g00788 147 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 41 131 IPR001179 GO:0003755
Gma03g00788 147 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 46 134 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00788 Gma-Chr3 28687821 28691623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00788 21 131 Calmodulin-binding Proteins AT3G25230 51.754 1.49e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00788 K09569 - gmx:100305479 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00788 03 28687821 28691623 Gma16g00786 16 11286697 11290890 GST
Gma18g01451 18 37112555 37117304 Gma03g00788 03 28687821 28691623 PCT
Gma08g03199 08 48736193 48740642 Gma03g00788 03 28687821 28691623 PCT
Gma03g00788 03 28687821 28691623 Gma18g01451 18 37112555 37117304 PCT
Gma03g00788 03 28687821 28691623 Gma08g03199 08 48736193 48740642 PCT