Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00772 ATGTTGATGTCACACACTACTATAAATGAGGTTCGAAATGACAATGATGATAAAGACCGCGAGAACAACGGCGTCGTTTCGTTTGTGAAGATCCTCACTCCCTCCGACGCCAACAACAGCGGTGGCTTCTCCGTGCCGTGCTTTTGCGCCGACTTGTGCTTCCCTCCACTCGACTTTTATGCCGATCCACCTATCCAGCTCCTCTCTGTCGCCGACATCCACGGCGTTGAGTGGCGCTTCCACCACATCTACCGCGGCACGCCATGTCGCCACCTCTTCACCACCGGCTGGAGCAAGTTCTTCAACCACAAGAAGCTTGTCATTGGCAACACCGTCATTTTCGTCAAGGACTCCAACGGTAGTGGGGTGCCACCTAGGTTTGGGGCGTCTTCATCTTATGATAATTTGCAATATTCTTATTTGCTCATGATTTTTGCGGGTGGGCTTGCAGGGGATCGGCGTGGAGTAGTTCCTGCTTCAGGCTTTTCTTTTAGTGCTCAAGAAATCTGGAAAATCATTAAAGAGAACAAGGATCTCGACCTTCCTGCACACAAGGATTGGTGTGAGTTGGAAGAGGCTGTGCTATCTGGCCCTATTTCTGGATTTGGGAAAAGCTCAATTCACTCCTTATTGCTTGTCTTCCAGAGGGGTATAAAAGTTCTACATAATGAACGGAACCATGGAGATCCACTTTCTTTGTACCTTCGGGCATTATGTCAAGAAGGGCCCATGGAGCTTGCTGTTGCAGGAGTGTCCACTGCCAATAAGCCTGAATCGCAATTGCCCATTGACTTGTAG 798 0.4925 MLMSHTTINEVRNDNDDKDRENNGVVSFVKILTPSDANNSGGFSVPCFCADLCFPPLDFYADPPIQLLSVADIHGVEWRFHHIYRGTPCRHLFTTGWSKFFNHKKLVIGNTVIFVKDSNGSGVPPRFGASSSYDNLQYSYLLMIFAGGLAGDRRGVVPASGFSFSAQEIWKIIKENKDLDLPAHKDWCELEEAVLSGPISGFGKSSIHSLLLVFQRGIKVLHNERNHGDPLSLYLRALCQEGPMELAVAGVSTANKPESQLPIDL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00772 265 SMART B3_2 28 133 IPR003340 GO:0003677
Gma03g00772 265 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 121 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma03g00772 265 SUPERFAMILY DNA-binding pseudobarrel domain 19 122 IPR015300 -
Gma03g00772 265 CDD B3_DNA 27 121 IPR003340 GO:0003677
Gma03g00772 265 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 139 182 - -
Gma03g00772 265 Pfam B3 DNA binding domain 28 127 IPR003340 GO:0003677
Gma03g00772 265 Gene3D - 25 123 IPR015300 -
Gma03g00772 265 PANTHER AUXIN RESPONSE FACTOR 13 121 - -
Gma03g00772 265 ProSiteProfiles B3 DNA-binding domain profile. 28 130 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00772 Gma-Chr3 27925129 27928523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00772 12 118 B3 DNA Binding Superfamily AT1G77850 64.486 3.23e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma03g00772 B3 7.3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00772 - - gmx:100805638 201.445