Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00748 ATGTTGCTAAACCTTCCTATGGCATCATTGCAAGAAAAATTCCAAGGAAAGATAATGGAGTTCAAAGATAAAAGAATGAAGGCAACGTCTGAGATTCTGAATAGTATGAGAATTCTAAAACTGCAAGCATGGGAGATGAAGTTCCTATCAAAGATTATTCAGCTTAGGAAGACTGAGGAGACATGGCTAAAGAAATTTCTAGTTGGTACAGCAATTGTTAGATTTCTCTTCTATAACACCCCAACTTTTATTGCTGTGGTTACATTTGGTGAATGTGCTCTTATCGGAATCCCACTTGAATCAGGAAAGGTCTTATCAGCACTTGCAACATTCAGAATTCTTCAAATGCCCATATATAGTCTTCCTGACACCATTTCAATGATTGCACAAACTAAGGTTTCCCTTGAAAGGATTGCATCATTTCTTCGTCTAGATGAGTGGAAGACTGATGTAGTAGAGAAGCTTCCACGGGATAGTTCTGATAAGGCAATTGAATTAGTAGATGGAAATTTCTCTTGGGATTTATCTTCCCCTAATCCAACATTGAAAAACGTAAATCTCACAGTTTTTCATGGTATGAGGGTTGTTGTATGTAGGGAAGTACCAAAGATATCTGGGACCCTAAAGATATGTGGTACAAAGGCTTATGTTTCTCAATCACCATGGATACAGAGTGGCAAGATAGAAGACAACATATTATTTGGTAAAGAGATGGATAGGGAAAAGTATGATGAGGTGCTAGAAGCATGTTCCTTGACAAAAGACCTTGAGGTTCTACCATTTGGTGATCAGACCACTATCGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAAGAGCCCGTGCTCTATACCAAGATTCTGATATATATCTGTTTGATGATCCCTTCAGTGCATTGGATGCTCATACAAGATCCCATCTCTTTAAGGAGTGCTTGCTTGGCCTTTTAAAATCAAAAACTGTTAATTATATAACTCATCAAGTAGAGTTCTTATCTGATGCTGATCTAATATTGGTCATGAGAGAAGGAAGAATAACTCAATCAGGAAAATACAATGACATTCTCAGGTCAGGCACTGATTTTATGGAACTTGTAGGTGCACACAAAGCAGCTTTGTCTTCAATCAAGTCCTTGGAGAGAAGGCCAACATTTAAAACATCAACTACCACCAAGGAGGACACAAGTTCAGTAAGTTGTTTTGAACTTGACAAAAATGTGGTATATGATCAAAATGATACGTCAGATGACATAGTTGAACCCAAAGGACAACTAGTTCAAGAAGAAGAACGGGAAAAGGCTTATGGAGGAGCTCTTGTACCCTTCATATTACTTTCAACGATACTCACTGTGGCTTTTCAAATTGCTAGCAATTATTGGATGATTTTGGCTACTCTTATGTCTACAACTGCAGAACCTGATATTGGAAGCTTTAAACTTATGGTTGTCTATGTTGCTTTGGCAATTGGAAGTTCCATTTTCACCTTTGCCAGAGCATTTCTTGCTGTGATAGCTGGATACAAGACAGCCACTGTGATCTTCAATAAAATGCATTTGTGCATTTTTCGAGCACCAATATCATATTTTGATGCCACCCCGAGTGGGCAAATCCTTAATAGAGCTTCCACAGACCAAAATGCACTAGATATGAACATTTCAAATCTAGTATGGGCAATTGTCTTCAATCTGGTTCAAATATTGGGAAATATTGTTGCGATGTCTCAAGCTGCATGGCAGGTGTTTATAGTATTGTTTCCAGTCACGACAGCATGCATATGGTACCAGCGATACTATTCTGCACCAGCAAGGGAGTTGGCACGATTAGTAGGTACATGCCAAGCTCCAGTAATACAACATTTTTCTGAAACAATTTCTGGATCAACAACCATAAGAAGCTTTGAGCAAGAATCAAGATTTAATGACATAAATATGAAATTGATAGACAGATATTCCCAGCCCAAATTATACAGTGCTATTGCAATTGAATGGCTGAATTTCAGATTGGATATTTTATCCACTCTCACATTTGCCTCCTGTTTGGTTTTCTTGATATCTTTTCCAAATTCAATGACTGATCCTGGTATCGCGGGATTGGCTGTGACATATGGACTTAATCTAAAAACTCATCATTCTCAAAGATGA 2154 0.3821 MLLNLPMASLQEKFQGKIMEFKDKRMKATSEILNSMRILKLQAWEMKFLSKIIQLRKTEETWLKKFLVGTAIVRFLFYNTPTFIAVVTFGECALIGIPLESGKVLSALATFRILQMPIYSLPDTISMIAQTKVSLERIASFLRLDEWKTDVVEKLPRDSSDKAIELVDGNFSWDLSSPNPTLKNVNLTVFHGMRVVVCREVPKISGTLKICGTKAYVSQSPWIQSGKIEDNILFGKEMDREKYDEVLEACSLTKDLEVLPFGDQTTIGEKGINLSGGQKQRVQRARALYQDSDIYLFDDPFSALDAHTRSHLFKECLLGLLKSKTVNYITHQVEFLSDADLILVMREGRITQSGKYNDILRSGTDFMELVGAHKAALSSIKSLERRPTFKTSTTTKEDTSSVSCFELDKNVVYDQNDTSDDIVEPKGQLVQEEEREKAYGGALVPFILLSTILTVAFQIASNYWMILATLMSTTAEPDIGSFKLMVVYVALAIGSSIFTFARAFLAVIAGYKTATVIFNKMHLCIFRAPISYFDATPSGQILNRASTDQNALDMNISNLVWAIVFNLVQILGNIVAMSQAAWQVFIVLFPVTTACIWYQRYYSAPARELARLVGTCQAPVIQHFSETISGSTTIRSFEQESRFNDINMKLIDRYSQPKLYSAIAIEWLNFRLDILSTLTFASCLVFLISFPNSMTDPGIAGLAVTYGLNLKTHHSQR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00748 717 Gene3D - 140 394 IPR027417 -
Gma03g00748 717 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 712 - -
Gma03g00748 717 CDD ABC_6TM_ABCC_D2 444 710 IPR044726 GO:0140359
Gma03g00748 717 CDD ABCC_MRP_domain1 164 349 - -
Gma03g00748 717 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 446 710 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g00748 717 Gene3D ABC transporter type 1, transmembrane domain 437 713 IPR036640 GO:0005524|GO:0016021
Gma03g00748 717 Pfam ABC transporter 215 301 IPR003439 GO:0005524
Gma03g00748 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 142 372 IPR003439 GO:0005524
Gma03g00748 717 SUPERFAMILY ABC transporter transmembrane region 8 145 IPR036640 GO:0005524|GO:0016021
Gma03g00748 717 Gene3D ABC transporter type 1, transmembrane domain 1 139 IPR036640 GO:0005524|GO:0016021
Gma03g00748 717 Pfam ABC transporter transmembrane region 446 688 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g00748 717 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 130 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g00748 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 371 IPR027417 -
Gma03g00748 717 SUPERFAMILY ABC transporter transmembrane region 445 710 IPR036640 GO:0005524|GO:0016021
Gma03g00748 717 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 1 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00748 Gma-Chr3 26402593 26405889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00748 217 388 Calmodulin-binding Proteins AT2G36910 31.285 6.51e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00748 - K05666 gmx:106794105 1160.21