Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00738 ATGGATGCTGTCATTGACAAACTTCCTCAAGGCCATGAGATTTCAAATGATTTGAAGAAGGAATTTTTTAAGAAATTGACAAATTCTAATATGACCAGAGAAGGAGAATACTGTCCTGAAAGATGTAATGGCAATGATCACTCTACTCCTTTATTCACCAAGCATGGCAAGCACAACATAAGAAGAATATTGTCTCTTCAAGAACCACTAGAAATTTATTATCAACTCCATGAGAATAGCTTTAATGTAGAACCAAATGAGCTCCAATCTAAGCAACTAAAATTAAGATCAGAAAAGGCACATTCACCATTGAGGATGTTTTCATTACCCTTACAAAGGATGCTTTCATTACCCAATCTCCAATCCTTTTCCTTTGCTTATCAGAATGGGGAGTTTCCTGACATTTCATCTGTCACTGAGCCAAAGCCAATCATGGTTTCTGGGGATGGAACTATGAAATCAGATATTGTTGCCCCTCAGACAAAGAGGCTTCACCTTAATTTACACTCAAAAGGTCAACTTCCGTTAGATACACCTGTAGAAAATTTGATTCAAAAACACCTTGTCAGTGTAGGAGAAAATGGTTTAGTGATTACTGATATTGTCGAACCAGGATCAGATTGTAGCTGTGAGATTAATGGCAAGGTGATCATGACAACTGATGATTTTGGACACAGTTATTCAAAAAATGGTGGCACTTTTAATGACCAAGATATTGAGACCATAAAAGAATACATGACTACAATAACATCAGTAGATTCAAAATTGAATATGAGACCAGGAGACAGACTAGATAACATGGCTGAGCAACAAGAGTCTATTATGGATTCTGTTAAAGTGAAAGAGACCACAGAGAATGCTAAAAAAATGGAGATTCAAAGCAAGCAGTTGAATTATGGCATTCCTCTTGTTGATATTAACAATAAAGACAAAGCTGAGTTTAATTATGTGAAATATATTCTTGAGATATCTGGACTGATTGGTAAAGATAGCATTTCAGCATGGCATTCTAGTGACCACCCAGTTGATCCATTACTATATGAAGAAATGGAAGGTGACCCTGATTTCTGTAATTATGGGGGTAGTGGTCAGTGTAATCACCATGTATTGTTTGATTTAATTAATGAGACATTGTTGGAACTTTCTGGGAGGTCTTACTGCTACTGTTCCATACCATTGTCATCGTCTCTTCCCTACACTCATCCAATTTCAAAAGGGTGCCATCCTCTTCATCAAGTGTGGACTCACATGAGGAAGTCCTTGTGCTTGAGATCTGAAGTTGGACTAACAATTGATGATCATGTGAGTCGAGATCTAGCAAGGCTTGATGGGTGGGTGAACCCTCAATTGTTTGCTCAATGTGTTAGTTTGGAACTTGAAGACTTGATTCTTCATGATCTTTTGGAGGAAATAACATGTGACTTAGCTTGCATTTAA 1437 0.3723 MDAVIDKLPQGHEISNDLKKEFFKKLTNSNMTREGEYCPERCNGNDHSTPLFTKHGKHNIRRILSLQEPLEIYYQLHENSFNVEPNELQSKQLKLRSEKAHSPLRMFSLPLQRMLSLPNLQSFSFAYQNGEFPDISSVTEPKPIMVSGDGTMKSDIVAPQTKRLHLNLHSKGQLPLDTPVENLIQKHLVSVGENGLVITDIVEPGSDCSCEINGKVIMTTDDFGHSYSKNGGTFNDQDIETIKEYMTTITSVDSKLNMRPGDRLDNMAEQQESIMDSVKVKETTENAKKMEIQSKQLNYGIPLVDINNKDKAEFNYVKYILEISGLIGKDSISAWHSSDHPVDPLLYEEMEGDPDFCNYGGSGQCNHHVLFDLINETLLELSGRSYCYCSIPLSSSLPYTHPISKGCHPLHQVWTHMRKSLCLRSEVGLTIDDHVSRDLARLDGWVNPQLFAQCVSLELEDLILHDLLEEITCDLACI 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00738 478 PANTHER PROTEIN TRM32 1 478 IPR044257 -
Gma03g00738 478 PANTHER DUF4378 DOMAIN PROTEIN 1 478 - -
Gma03g00738 478 Pfam Domain of unknown function (DUF4378) 313 470 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00738 Gma-Chr3 25864292 25865961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00738 266 464 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 38.462 7.95e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00738 - - gmx:121174644 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00738 03 25864292 25865961 Gma03g00738 03 25864292 25865961 ECH