Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00737 ATGGGCTCACCTTGTAGACTCTTTTCGAAAGCCATTACTCTCGTCGCTTGCTCTCTCCGCAGTTTCTACCTTTTTCCTTCGCTCAATTCCCGCCACTTTTCTGCTAATAACAGAGAAGGCTATATGGCTGAGGAGAAATCAGAGCAGCATTGTTCGGAGAATAAGCAAACTAATGCTAATTCCAGCTCTTCTGTATCAGAAGGCAGTGGCAGTGCTATGCCCAAGTCATCAACGGAACGTAAATCAGCATTGCCATCTAATCGGAGAACCACTGGCCCTGTTAGGCGTGCAAGGGGTGGTTGGACGGAAGAGGATGATGACACATTAACGAATGCTGTTCAAGTTTTTAATGGCAAGAATTGGAAGAAAATAGCTGAGTTTTTACCGGGTAAATCAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTCATCCAGAACTCGTTAAAGGACCTTGGACTCAGGAGGAGGATGATAAAATAATTGAAATGGTGTCTACACATGGACCTAAAAAATGGTCTTTGATATCTAAGTCTTTGCCTGGTCGAATAGGAAAACAGTGCCGAGAACGATGGTGCAATCATCTTAATCCTGACATAAAGAAGGATCCCTGGACTCAGGAGGAGGAATTAGCCCTTATGGATGCTCATCGTATACATGGCAACAAATGGGCTGAAATAGCTAAGGTTCTTCATGGAAGGACTGATAATTCAATAAAGAACCATTGGAATAGTTCTTTGAAGAAAAAGATGAATTTCTATTTGGCTACGGGAAGACTTCCCCCCATTGTATCATCATCCAAAACTACAGACATTAATCTGGGTAACAGTGATAAGAATCAACTAGAGTCCTCAGAAACAGTTAGAGAGTTCGGTGATTCTTCAAATGTTCCTGCAAAAGGGTCTGCTGATTCTGACTGCATAGAATGCAATAGATCATCCAACAAAGGTTTCAGCTGTAGTAACTTAGAACCAGTGTTTGGAGATTATTTTAGAATAAACAGTGAGCCAAAATTTGAGAATCCTGGACTCAATGACAACCCAAGAGTTGATCATTGCATGAGTAATGGTGAAAATAAGAGTTGCAGTTTAACCAGAAATTTTTATTCAAAGGAAAGTCAAACCCTTGGTTCTTTTTGTTATGAACCAACACTTCCTTTAGATTCTTATTATTCTAATATCTCTGGCCTGCAGCAAAATGAGTTATTTGCTTCGCCAATGATGTCATCTGTTGGTTACTTAACTCCACCTCCGGTGAAGGGAAGTGAATTATGCTCAGAATCTCCTGAATCAATATTGAAAAAGGCAGCTAAAACTTTCCCCACTCCTTCCATCTTGAGAAAGAGGAGTGTAGTCAAAAGACCTGTCACTCCTAGTGCGGTTGCAAAAGGAGTTAATGATTCACATGCTTATAATGAACAAGAGAGAACAAATGATATTACTGGTTCTGAAGTTGTGCGGTTACCTGTGAGTCCAGTAAACAATTGCTATGGGAGTAACATTCCCCATAATAAGGCATTCAACACAACTTCTCCATACCGATCAAGATCCAGGCAAACAGCTATTAAAGACATAGTTCGTAAGTTGGACCACCATTGGTCTTCCCCTTGA 1611 0.4072 MGSPCRLFSKAITLVACSLRSFYLFPSLNSRHFSANNREGYMAEEKSEQHCSENKQTNANSSSSVSEGSGSAMPKSSTERKSALPSNRRTTGPVRRARGGWTEEDDDTLTNAVQVFNGKNWKKIAEFLPGKSEVQCLHRWQKVLHPELVKGPWTQEEDDKIIEMVSTHGPKKWSLISKSLPGRIGKQCRERWCNHLNPDIKKDPWTQEEELALMDAHRIHGNKWAEIAKVLHGRTDNSIKNHWNSSLKKKMNFYLATGRLPPIVSSSKTTDINLGNSDKNQLESSETVREFGDSSNVPAKGSADSDCIECNRSSNKGFSCSNLEPVFGDYFRINSEPKFENPGLNDNPRVDHCMSNGENKSCSLTRNFYSKESQTLGSFCYEPTLPLDSYYSNISGLQQNELFASPMMSSVGYLTPPPVKGSELCSESPESILKKAAKTFPTPSILRKRSVVKRPVTPSAVAKGVNDSHAYNEQERTNDITGSEVVRLPVSPVNNCYGSNIPHNKAFNTTSPYRSRSRQTAIKDIVRKLDHHWSSP 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00737 536 ProSiteProfiles Myb-like domain profile. 93 144 IPR001005 -
Gma03g00737 536 PANTHER MYB PROTEIN-RELATED 64 474 - -
Gma03g00737 536 CDD SANT 101 144 IPR001005 -
Gma03g00737 536 ProSiteProfiles Myb-like domain profile. 145 196 IPR001005 -
Gma03g00737 536 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 251 IPR017930 -
Gma03g00737 536 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
Gma03g00737 536 MobiDBLite consensus disorder prediction 53 89 - -
Gma03g00737 536 Gene3D - 97 149 - -
Gma03g00737 536 Gene3D - 150 201 - -
Gma03g00737 536 Pfam Myb-like DNA-binding domain 98 144 IPR001005 -
Gma03g00737 536 CDD SANT 152 196 IPR001005 -
Gma03g00737 536 SUPERFAMILY Homeodomain-like 147 243 IPR009057 -
Gma03g00737 536 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 144 IPR017930 -
Gma03g00737 536 SMART sant 149 198 IPR001005 -
Gma03g00737 536 SMART sant 201 249 IPR001005 -
Gma03g00737 536 SMART sant 97 146 IPR001005 -
Gma03g00737 536 Pfam Myb-like DNA-binding domain 153 211 - -
Gma03g00737 536 CDD SANT 204 247 IPR001005 -
Gma03g00737 536 MobiDBLite consensus disorder prediction 42 102 - -
Gma03g00737 536 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 145 200 IPR017930 -
Gma03g00737 536 ProSiteProfiles Myb-like domain profile. 197 247 IPR001005 -
Gma03g00737 536 Gene3D - 203 283 - -
Gma03g00737 536 PANTHER MYB-RELATED PROTEIN B-LIKE 64 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00737 Gma-Chr3 25847400 25856438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00737 88 522 MYB Transcription Factor Family AT5G02320 46.203 2.23e-117 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma03g00737 Myb_DNA-bind_6 1.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00737 K09422 - gmx:100777236 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00737 03 25847400 25856438 Gma03g00737 03 25847400 25856438 ECH