Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma03g00732 | ATGAACACATATCTTAACAGGGATGCTAAGTCGTGCTTGGAGAGGTGGAAGAACTACCTCAAGCCTGGCATCAAAAAAGGCTCTCTTACTGAAGAAGAGCAGCGCCTTGTCATCCACCTTCAAGCAAAATATGGAAACAAATGGAAGAAAATCGCTGCTGAAGTCCCAGGGCGCACTGCTAAGCGGTTAGGCAAGTGGTGGGAAGTCTTCAAAGAGAAGCAGCAGAGAGAGAAAAAGGAGATCAATAGAATTGCCGACCCAATTAACAATAGTAAGTACGAGCACATACTCGAGAGTTTTGCAGAGAAACTAGTTAAGGAACGCCCTTCACCATCATTTGTCATGGCTGCTTCCGATGGGGCATTTCTGCTCACTGATACACCAGCACCTGCATCTTCCTTGCGTCCTTCTTGGCTTTCCAATTCTAGTAGTGCTGCAGCCATCGGCCCAAGTTCCCTTTCTGTGAAACTAAGTCTTTCTTCCTCAACGGTGGCCACACCTCCATTTTCATGGTTGCCACCCGAGAGAGGACCAGACAATGCTCCTTTTGTTTTGGGGAATGTATCAGCGCTTCATGGAGCTATTCCAACTCTAAGTGATAGCATGCATATGTCTCAGATGGTGGAGCACTGTAAAGAGTTGGAAGAGGGGCATCGTGCTTTGGCCACGCACAAGAAGGAGGCAGCTTGGAGGTTAAGTCGGGTGGAGTTACAGTTGGAGTCAGAGAAGGCCAACCGAAGAAGGGAGAAGATTGAAGAATTTGAAGCAAAGATTAAAGCTCTTCAGGAAGAGGAGAAAGCTGCTTTAGGTAGAATTGAAGCAGAATACAGAGAACAGTTAGCTGCATTGAGGAGAGATGCTGAAAACAAGGAGCAAAAGTTGGCAGAACAATGGGATGCAAAGCATTTACGGTTTACTAGGTTACTAGAGCAATTAGGATGCAGAGCAGGGCTCCTTGAGCCAAATGCAAGATGA | 975 | 0.4656 | MNTYLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIHLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKEINRIADPINNSKYEHILESFAEKLVKERPSPSFVMAASDGAFLLTDTPAPASSLRPSWLSNSSSAAAIGPSSLSVKLSLSSSTVATPPFSWLPPERGPDNAPFVLGNVSALHGAIPTLSDSMHMSQMVEHCKELEEGHRALATHKKEAAWRLSRVELQLESEKANRRREKIEEFEAKIKALQEEEKAALGRIEAEYREQLAALRRDAENKEQKLAEQWDAKHLRFTRLLEQLGCRAGLLEPNAR | 324 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma03g00732 | 324 | Gene3D | - | 29 | 94 | - | - | |
Gma03g00732 | 324 | SMART | sant | 25 | 73 | IPR001005 | - | |
Gma03g00732 | 324 | ProSiteProfiles | Myb-like domain profile. | 21 | 71 | IPR001005 | - | |
Gma03g00732 | 324 | PANTHER | TRANSCRIPTION FACTOR AS1 | 1 | 324 | IPR031055 | GO:0005634|GO:0006351|GO:0010338 | |
Gma03g00732 | 324 | Coils | Coil | 232 | 297 | - | - | |
Gma03g00732 | 324 | PANTHER | PROTEIN ROUGH SHEATH 2 HOMOLOG | 1 | 324 | - | - | |
Gma03g00732 | 324 | CDD | SANT | 30 | 71 | IPR001005 | - | |
Gma03g00732 | 324 | Pfam | Myb-like DNA-binding domain | 26 | 61 | IPR001005 | - | |
Gma03g00732 | 324 | SUPERFAMILY | Homeodomain-like | 6 | 74 | IPR009057 | - | |
Gma03g00732 | 324 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 21 | 75 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma03g00732 | Gma-Chr3 | 25447594 | 25448568 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma03g00732 | 1 | 315 | MYB Transcription Factor Family | AT2G37630 | 60.778 | 7.31e-123 | 355 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Gma03g00732 | Myb_DNA-binding | 4.1e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma03g00732 | K09422 | - | gmx:100101908 | 616.69 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma03g00732 | 03 | 25447594 | 25448568 | Gma03g00732 | 03 | 25447594 | 25448568 | ECH |