Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00732 ATGAACACATATCTTAACAGGGATGCTAAGTCGTGCTTGGAGAGGTGGAAGAACTACCTCAAGCCTGGCATCAAAAAAGGCTCTCTTACTGAAGAAGAGCAGCGCCTTGTCATCCACCTTCAAGCAAAATATGGAAACAAATGGAAGAAAATCGCTGCTGAAGTCCCAGGGCGCACTGCTAAGCGGTTAGGCAAGTGGTGGGAAGTCTTCAAAGAGAAGCAGCAGAGAGAGAAAAAGGAGATCAATAGAATTGCCGACCCAATTAACAATAGTAAGTACGAGCACATACTCGAGAGTTTTGCAGAGAAACTAGTTAAGGAACGCCCTTCACCATCATTTGTCATGGCTGCTTCCGATGGGGCATTTCTGCTCACTGATACACCAGCACCTGCATCTTCCTTGCGTCCTTCTTGGCTTTCCAATTCTAGTAGTGCTGCAGCCATCGGCCCAAGTTCCCTTTCTGTGAAACTAAGTCTTTCTTCCTCAACGGTGGCCACACCTCCATTTTCATGGTTGCCACCCGAGAGAGGACCAGACAATGCTCCTTTTGTTTTGGGGAATGTATCAGCGCTTCATGGAGCTATTCCAACTCTAAGTGATAGCATGCATATGTCTCAGATGGTGGAGCACTGTAAAGAGTTGGAAGAGGGGCATCGTGCTTTGGCCACGCACAAGAAGGAGGCAGCTTGGAGGTTAAGTCGGGTGGAGTTACAGTTGGAGTCAGAGAAGGCCAACCGAAGAAGGGAGAAGATTGAAGAATTTGAAGCAAAGATTAAAGCTCTTCAGGAAGAGGAGAAAGCTGCTTTAGGTAGAATTGAAGCAGAATACAGAGAACAGTTAGCTGCATTGAGGAGAGATGCTGAAAACAAGGAGCAAAAGTTGGCAGAACAATGGGATGCAAAGCATTTACGGTTTACTAGGTTACTAGAGCAATTAGGATGCAGAGCAGGGCTCCTTGAGCCAAATGCAAGATGA 975 0.4656 MNTYLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIHLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKEINRIADPINNSKYEHILESFAEKLVKERPSPSFVMAASDGAFLLTDTPAPASSLRPSWLSNSSSAAAIGPSSLSVKLSLSSSTVATPPFSWLPPERGPDNAPFVLGNVSALHGAIPTLSDSMHMSQMVEHCKELEEGHRALATHKKEAAWRLSRVELQLESEKANRRREKIEEFEAKIKALQEEEKAALGRIEAEYREQLAALRRDAENKEQKLAEQWDAKHLRFTRLLEQLGCRAGLLEPNAR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00732 324 Gene3D - 29 94 - -
Gma03g00732 324 SMART sant 25 73 IPR001005 -
Gma03g00732 324 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Gma03g00732 324 PANTHER TRANSCRIPTION FACTOR AS1 1 324 IPR031055 GO:0005634|GO:0006351|GO:0010338
Gma03g00732 324 Coils Coil 232 297 - -
Gma03g00732 324 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 324 - -
Gma03g00732 324 CDD SANT 30 71 IPR001005 -
Gma03g00732 324 Pfam Myb-like DNA-binding domain 26 61 IPR001005 -
Gma03g00732 324 SUPERFAMILY Homeodomain-like 6 74 IPR009057 -
Gma03g00732 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00732 Gma-Chr3 25447594 25448568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00732 1 315 MYB Transcription Factor Family AT2G37630 60.778 7.31e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma03g00732 Myb_DNA-binding 4.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00732 K09422 - gmx:100101908 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00732 03 25447594 25448568 Gma03g00732 03 25447594 25448568 ECH