Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00728 ATGGCGACCCCCCCAAACGACGCCGCATCGACGAAGAAGCCACAACCCATCCCTTGGACCCACCAGGAGACCGTGCACCTCATCCGCGCCTACCAGGAGAAGTGGTACGCCCTCAAGCGGGGCCCACTGCGCCACAACCAGTGGGAGGAGGTCGCCGTCGTCGTCGCCGCACGCTGCGGCTACGACCTTGCCCACCCCGCCAAGTCCGCCCTTCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCATCGCGCCGAGAAGAAACAACAACACTCCGCCGCCGACGCGCTCCGCCCCGGCGCGTGGCAGTACAACGCCCTCATGGATGACCTTGAGCGCGGCCCCCTCCCCATCTCCGCCCTTGCTCCTCTATACAGCGACGAAGAAGAAGACGAAGACGACGACGACGCCATCGACGATCAATACGACAATGATGGCGACGAGGGTTTCATTAACATCAAGTCGAAGAGTATTAACTGTATCCTCAGCGAGAGACCTGTGAGAATGAGAAGCAACGACAGAGGGTTTTTGAGAGAGCACGTTGTTGTTGTTGAAGAAGAAGAAGAAGAAGAAgaggaggaggaggaggaggaggaggaggagAATGAGAATGAAGACGACGATGTTTTGGGGTTGTCGATGGAGATGAGGGTTTTCGCGGAGAGGTTTATTGGGATGGAGAGTTTGAAGATGGAGATGATGAAGGAGACGGAGCGGTGTAGGTTGGAGATGGAGAAGAAGCGGATCCAGATGATTCTGGAATCACAAAGGAGGATCGTTGATTCCATTGGTAAGGCGTTTGGGTCTAGCAAGAGGGTCAAGATTACTCAACAAAACTGA 843 0.5386 MATPPNDAASTKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVAARCGYDLAHPAKSALQCRHKMEKLRQRHRAEKKQQHSAADALRPGAWQYNALMDDLERGPLPISALAPLYSDEEEDEDDDDAIDDQYDNDGDEGFINIKSKSINCILSERPVRMRSNDRGFLREHVVVVEEEEEEEEEEEEEEEEENENEDDDVLGLSMEMRVFAERFIGMESLKMEMMKETERCRLEMEKKRIQMILESQRRIVDSIGKAFGSSKRVKITQQN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00728 280 MobiDBLite consensus disorder prediction 127 147 - -
Gma03g00728 280 ProSiteProfiles Myb-like domain profile. 18 81 IPR001005 -
Gma03g00728 280 Coils Coil 178 209 - -
Gma03g00728 280 MobiDBLite consensus disorder prediction 127 150 - -
Gma03g00728 280 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 276 IPR044823 -
Gma03g00728 280 Gene3D - 19 86 - -
Gma03g00728 280 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 276 - -
Gma03g00728 280 Pfam Myb/SANT-like DNA-binding domain 18 111 IPR044822 -
Gma03g00728 280 MobiDBLite consensus disorder prediction 185 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00728 Gma-Chr3 24970572 24973034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00728 19 88 Trihelix Transcription Factor Family AT3G14180 31.429 2.69e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma03g00728 Myb_DNA-bind_4 2.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00728 - - gmx:100814846 495.738