Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00724 ATGGCGGGAGTGAGGGAGCAGGACCAGTATATGCCGATAGCAAACGTGATAAGGATCATGCGGAGGATTCTACCGGCGCACGCGAAGATCTCGGACGACGCGAAGGAGACAATCCAGGAGTGCGTGTCGGAGTACATAAGCTTCATCACGGCAGAGGCGAATGAGCGATGCCAGCGCGAGCAGCGAAAGACGGTGACTGCAGAGGACGTGCTGTGGGCGATGGAGAAGCTCGGCTTCGACAACTACGCCCACCCTCTCTCTCTTTACCTTCACCGCTATCGCAAGACCGAAGGCGAACCCGCTTCCGCCAGACGTGCTTCTGCATCTGCATCCCCATCGATGCAGATGCACCCACGCACACACCCACACTCACATCCACCTAATTATTCTCATCATGGCTTCGGAATGTTTGACTTTGACCCATCATCGCAAGGGTTTTACAGGGATGATGCATCTAGTTCTGGCTCTGGTGGATTTGTTGCCAGTTTTGATCCTTATGCTAACATCAAACGTGATCCCCTGTGA 525 0.541 MAGVREQDQYMPIANVIRIMRRILPAHAKISDDAKETIQECVSEYISFITAEANERCQREQRKTVTAEDVLWAMEKLGFDNYAHPLSLYLHRYRKTEGEPASARRASASASPSMQMHPRTHPHSHPPNYSHHGFGMFDFDPSSQGFYRDDASSSGSGGFVASFDPYANIKRDPL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00724 174 MobiDBLite consensus disorder prediction 99 133 - -
Gma03g00724 174 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 11 74 IPR003958 -
Gma03g00724 174 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 4 124 - -
Gma03g00724 174 Gene3D Histone, subunit A 2 123 IPR009072 GO:0046982
Gma03g00724 174 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 124 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gma03g00724 174 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Gma03g00724 174 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Gma03g00724 174 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Gma03g00724 174 SUPERFAMILY Histone-fold 7 111 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00724 Gma-Chr3 24758333 24758857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00724 4 111 CCAAT-HAP3 Transcription Factor Family AT5G47670 81.481 4.53e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma03g00724 CBFD_NFYB_HMF 4.3e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00724 K08065 - gmx:100811633 330.102