Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00716 ATGGATTCGGATCAAGGCAAGCTTTTCATCGGTGGGATTTCATGGGATACGACGGAGGACAAGCTCAAGGAGCATTTCGGTAACTACGACGACGTTTTGAGCACTTCCGTCATGCGGGAGAAGAACACTGGGAAGCCAAGGGGCTTCGGTTTCGTCGTTTTTGCGGATCCTAACATTCTAGATAGGGTTATGGAAGACAAACATGTCATAGATGGCAGAACGtgtaatagacaaaaaggaatcactgaat 250 0.432 MDSDQGKLFIGGISWDTTEDKLKEHFGNYDDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVMEDKHVIDGRTCNRQKGITE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00716 83 Gene3D - 4 82 IPR012677 -
Gma03g00716 83 PANTHER - 1 77 - -
Gma03g00716 83 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 75 IPR000504 GO:0003723
Gma03g00716 83 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 83 IPR000504 GO:0003723
Gma03g00716 83 SMART rrm1_1 7 78 IPR000504 GO:0003723
Gma03g00716 83 PANTHER TRANSFORMER-2-RELATED 1 77 - -
Gma03g00716 83 SUPERFAMILY RNA-binding domain, RBD 3 75 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00716 Gma-Chr3 23169179 23171069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00716 2 54 C2H2 Transcription Factor Family AT2G19380 41.509 4.88e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00716 K14411 - gmx:102666475 176.022