Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma03g00713 | ATGGAAGGAGGTCGCCGGAGGATAACACTTTACGATCAAATGAAAGCCGGCAACAGCAGCCGATACTCACTCGCCAGCCTCATGCTGGGCGATGTCGTTTTCAAGAAGGTGgaagcagaagaagcagaagaagcagaagCCGAAGCCGAAGCGAGCTGTGAGCTGAGCCGAAGCCGGACTCTCCAAGACATCATTCGCGAAGAAAAACCTAGCAACAGCAGCAACAACACGAAGGATCGCAACTCTTGGAGAGCCTTCACGGCGAAGCTTCGGCTCAAGCGCGCCATCGGCTCGGCTTGGTCCTCCACCACCACTATCACTAATCACAGCAATGATGATAGAAATTTACCTAATATACCCGAAACTCGCCATGACTCGGACGAGTTGACTCAGCAGAACGACATCGTTGTGGAAGGCGCCAACGATTCGGATCCGATCGCGCGGTTCGGGTCACCGGTGGAACACGTGGAAGCCGTTGGCAACTCCTCCGACGGAGAGAACAACCACGAGGCGGTGGTTGGAGTGTCGCTGATGGATTTGTTGGAGGAAGCGGAGCAGGAAATGGATTTATATAGAGTGAGCGATGATGACGATGATGTGGCAGAATATGAGAAGAGAgaagaagaaaaaggaggtgtggaagaagaaatagggagtgtggTGGAGTATAATTGTTGCGTGTGCATGGTGCGGCATAAAGGCGCGGCGTTTATTCCGTGCGGGCACACGTTCTGCAGAACGTGTTCGAGGGAGATTTGGGTGAGCAGAGGGAACTGCCCTCTCTGCAACAATTTAATTTTGGAAATTCTTGATATTTTCTGA | 822 | 0.4781 | MEGGRRRITLYDQMKAGNSSRYSLASLMLGDVVFKKVEAEEAEEAEAEAEASCELSRSRTLQDIIREEKPSNSSNNTKDRNSWRAFTAKLRLKRAIGSAWSSTTTITNHSNDDRNLPNIPETRHDSDELTQQNDIVVEGANDSDPIARFGSPVEHVEAVGNSSDGENNHEAVVGVSLMDLLEEAEQEMDLYRVSDDDDDVAEYEKREEEKGGVEEEIGSVVEYNCCVCMVRHKGAAFIPCGHTFCRTCSREIWVSRGNCPLCNNLILEILDIF | 273 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma03g00713 | 273 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 194 | 273 | IPR013083 | - | |
Gma03g00713 | 273 | Coils | Coil | 39 | 59 | - | - | |
Gma03g00713 | 273 | MobiDBLite | consensus disorder prediction | 106 | 127 | - | - | |
Gma03g00713 | 273 | PANTHER | OS01G0917900 PROTEIN | 122 | 273 | - | - | |
Gma03g00713 | 273 | PANTHER | OS01G0917900 PROTEIN | 2 | 113 | - | - | |
Gma03g00713 | 273 | SMART | ring_2 | 225 | 262 | IPR001841 | - | |
Gma03g00713 | 273 | SUPERFAMILY | RING/U-box | 224 | 269 | - | - | |
Gma03g00713 | 273 | ProSiteProfiles | Zinc finger RING-type profile. | 225 | 263 | IPR001841 | - | |
Gma03g00713 | 273 | PANTHER | OS01G0917900 PROTEIN | 2 | 113 | - | - | |
Gma03g00713 | 273 | PANTHER | OS01G0917900 PROTEIN | 122 | 273 | - | - | |
Gma03g00713 | 273 | CDD | RING-HC | 225 | 262 | - | - | |
Gma03g00713 | 273 | Pfam | Zinc finger, C3HC4 type (RING finger) | 223 | 266 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma03g00713 | Gma-Chr3 | 22944467 | 22946620 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma03g00713 | 1 | 273 | C3H Transcription Factor Family | AT3G25030 | 35.357 | 3.38e-45 | 151 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma03g00713 | - | - | gmx:100802736 | 488.419 |