Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00713 ATGGAAGGAGGTCGCCGGAGGATAACACTTTACGATCAAATGAAAGCCGGCAACAGCAGCCGATACTCACTCGCCAGCCTCATGCTGGGCGATGTCGTTTTCAAGAAGGTGgaagcagaagaagcagaagaagcagaagCCGAAGCCGAAGCGAGCTGTGAGCTGAGCCGAAGCCGGACTCTCCAAGACATCATTCGCGAAGAAAAACCTAGCAACAGCAGCAACAACACGAAGGATCGCAACTCTTGGAGAGCCTTCACGGCGAAGCTTCGGCTCAAGCGCGCCATCGGCTCGGCTTGGTCCTCCACCACCACTATCACTAATCACAGCAATGATGATAGAAATTTACCTAATATACCCGAAACTCGCCATGACTCGGACGAGTTGACTCAGCAGAACGACATCGTTGTGGAAGGCGCCAACGATTCGGATCCGATCGCGCGGTTCGGGTCACCGGTGGAACACGTGGAAGCCGTTGGCAACTCCTCCGACGGAGAGAACAACCACGAGGCGGTGGTTGGAGTGTCGCTGATGGATTTGTTGGAGGAAGCGGAGCAGGAAATGGATTTATATAGAGTGAGCGATGATGACGATGATGTGGCAGAATATGAGAAGAGAgaagaagaaaaaggaggtgtggaagaagaaatagggagtgtggTGGAGTATAATTGTTGCGTGTGCATGGTGCGGCATAAAGGCGCGGCGTTTATTCCGTGCGGGCACACGTTCTGCAGAACGTGTTCGAGGGAGATTTGGGTGAGCAGAGGGAACTGCCCTCTCTGCAACAATTTAATTTTGGAAATTCTTGATATTTTCTGA 822 0.4781 MEGGRRRITLYDQMKAGNSSRYSLASLMLGDVVFKKVEAEEAEEAEAEAEASCELSRSRTLQDIIREEKPSNSSNNTKDRNSWRAFTAKLRLKRAIGSAWSSTTTITNHSNDDRNLPNIPETRHDSDELTQQNDIVVEGANDSDPIARFGSPVEHVEAVGNSSDGENNHEAVVGVSLMDLLEEAEQEMDLYRVSDDDDDVAEYEKREEEKGGVEEEIGSVVEYNCCVCMVRHKGAAFIPCGHTFCRTCSREIWVSRGNCPLCNNLILEILDIF 273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00713 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 273 IPR013083 -
Gma03g00713 273 Coils Coil 39 59 - -
Gma03g00713 273 MobiDBLite consensus disorder prediction 106 127 - -
Gma03g00713 273 PANTHER OS01G0917900 PROTEIN 122 273 - -
Gma03g00713 273 PANTHER OS01G0917900 PROTEIN 2 113 - -
Gma03g00713 273 SMART ring_2 225 262 IPR001841 -
Gma03g00713 273 SUPERFAMILY RING/U-box 224 269 - -
Gma03g00713 273 ProSiteProfiles Zinc finger RING-type profile. 225 263 IPR001841 -
Gma03g00713 273 PANTHER OS01G0917900 PROTEIN 2 113 - -
Gma03g00713 273 PANTHER OS01G0917900 PROTEIN 122 273 - -
Gma03g00713 273 CDD RING-HC 225 262 - -
Gma03g00713 273 Pfam Zinc finger, C3HC4 type (RING finger) 223 266 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma03g00713 Gma-Chr3 22944467 22946620 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00713 1 273 C3H Transcription Factor Family AT3G25030 35.357 3.38e-45 151
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00713 - - gmx:100802736 488.419