Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00701 ATGAACAGGGGAATTGAAGTTCTTTCTCCAGCCTCATACCTCCGAAGTTCCAATTGGCTGTTCCAAGAAAGCTTGGGGACCAGGTGGACTCCACAGGAGAACAAGCTCTTTGAGAATGCTTTGGCTGTGTTTGACAAGGACACTCCGGACCGGTGGCTGAAGGTGGCGGCCTTGATTCCCGGCAAGACGGTCGGCGATGTGATCAAACAGTATAGGGAACTTGAAGAAGATGTGAGTGTCATTGAATCAGGGTTTATTCCACTTCCAGGGTACACTGCTGCTGATTCCTTTACATTGGAGTGGGTCAACAATCAAGGATTTGATGGGCTCAGGCAGTTTTATGGTGTTACTGGCAAAAGGGGTGCTTCCACTAGACCATCTGAGCAGGAGAGGAAGAAAGGTGTGCCATGGACTAAAGAGGAGCACAGGCAATTTCTGATGGGTCTGAAGAAGTATGGTAAAGGAGACTGGAGAAACATCTCTCGCAATTTTGTGACCACAAGAACACCAACTCAGGTTGCAAGTCATGCTCAGAAGTATTTCATCAGGCAACTAAGTGGAGGAAAGGACAAGAAGAGATCCAGTATCCATGACATCACAATGGTGAATCTCCCAGAAGCAAAATCTCCTTCATCAGAGAGTAACAACAGACCCTATTCACCAGATCACTCAGTGAAGGATGTGAATCCACCATCCCAGAATCAAAGATTGTCTACTACTATGGTAATTAAACAGGAACATGATTGGAAATTGCCATGTGAAACTGTGCCTATGCTTTTCAATTCCACAAATGGAAACATGTTCATGACACCACTTTGTGGGATTTCTTCATATGGATCTAAACCACTTCAGGAGCAGTATTTCCTCAGTGGATGCCAGTTTGGACCTTATGATACAATTATGCAAATGCCGTCCATGCAAAATCAATGA 930 0.4495 MNRGIEVLSPASYLRSSNWLFQESLGTRWTPQENKLFENALAVFDKDTPDRWLKVAALIPGKTVGDVIKQYRELEEDVSVIESGFIPLPGYTAADSFTLEWVNNQGFDGLRQFYGVTGKRGASTRPSEQERKKGVPWTKEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLSGGKDKKRSSIHDITMVNLPEAKSPSSESNNRPYSPDHSVKDVNPPSQNQRLSTTMVIKQEHDWKLPCETVPMLFNSTNGNMFMTPLCGISSYGSKPLQEQYFLSGCQFGPYDTIMQMPSMQNQ 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00701 309 MobiDBLite consensus disorder prediction 201 234 - -
Gma03g00701 309 SUPERFAMILY Homeodomain-like 130 184 IPR009057 -
Gma03g00701 309 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Gma03g00701 309 CDD SANT 28 74 IPR001005 -
Gma03g00701 309 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Gma03g00701 309 Gene3D - 135 185 - -
Gma03g00701 309 PANTHER TRANSCRIPTION FACTOR DIVARICATA 1 246 - -
Gma03g00701 309 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 132 184 IPR006447 GO:0003677
Gma03g00701 309 SUPERFAMILY Homeodomain-like 27 83 IPR009057 -
Gma03g00701 309 SMART sant 25 77 IPR001005 -
Gma03g00701 309 SMART sant 133 183 IPR001005 -
Gma03g00701 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
Gma03g00701 309 MobiDBLite consensus disorder prediction 118 137 - -
Gma03g00701 309 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Gma03g00701 309 Gene3D - 22 88 - -
Gma03g00701 309 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
Gma03g00701 309 MobiDBLite consensus disorder prediction 205 234 - -
Gma03g00701 309 CDD SANT 136 181 IPR001005 -
Gma03g00701 309 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 246 IPR043363 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00701 Gma-Chr3 22248348 22251015 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma03g00701 Myb_DNA-binding 4.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00701 - - gmx:778077 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00701 03 22248348 22251015 Gma18g00282 18 2354988 2357044 ECH
Gma03g00701 03 22248348 22251015 Gma11g02292 11 38282740 38285188 ECH
Gma03g00701 03 22248348 22251015 Gma03g00701 03 22248348 22251015 ECH
Gma03g00701 03 22248348 22251015 Gma18g00613 18 6014645 6017075 ECH