Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00700 ATGGATTCTCATTGGGTTCGAATGGTGCTTCTCATTGCTTGCATTCTTCCAGCTTTGGTTGAATGCAGAGTGAGGCACTACAAATTTCATGTGGTGTCTAAACAAACCAATAGATTGTGTTCAAGCAAATCTATTGTCACCATTAATGGGAAGTTCCCAGGACCCACACTTTACGCTAGGGAAGATGATACAGTGCTGGTCAAAGTCATTAACCAAGTCAACCACAACGTTACCATCCATTGGCATGGTGTGAGGCAATTGAGAACTGGTTGGGCTGATGGACCTGCATATGTCACACAGTGCCCAATTCAACCAGGGCAAACCTATCTGTACAATTTCACCCTCACCGGGCAAAGAGGAACACTTCTTTATCATGCACATGTTAACTGGCTAAGGTCAACTCTCCATGGTGCCTTAGTTATCTTGCCAAAGAGAGGTGTGCCTTATCCCTTCCCAAAGCCAGATGATGAATTGGTTGTGGTATTAGGAGAATGGTGGAAATCCGATACTGAAGCTATTATCAATGAAGCTCTCAAATCAGGATTGGCACCAAATGTCTCAGATGCTCATACTATTAATGGCCTTCCAGGGGCAGTTACCAATTGTTCTACACAAGATGTTTACAACCTACCCGTGGAGAGTGGAAAGACCTACCTGTTGAGAATTATCAATGCTGCACTCAATGAAGAGCTCTTCTTCAAAATTGCTGGCCACAAGCTCACAGTGGTAGAAGTTGATGCCACATATGTAAAGCCCTTCAAGATTGAAACAATTTTGATAGCCCCTGGTCAAACCACCAATGTTCTTTTAAATGCTGACCAAAAATTTGGCAAGTACTTGGTAGCAGCTTCTCCTTTCATGGATGCTCCTATTGCTGTGGACAACTTGACTGCCACAGCAACATTGCACTACACAGGAACTCTTGCTGCCACTCCCACAATTCTCACCACCCCACCTCCCAAAAATTCTACACAAATTGCCAACAACTTCATCTCCTCTCTTAGAGGCCTTAACTCCAAGAAATACCCTGTCAATGTCCCATTAACTGTTGATCACTCACTTTTCTTCACTGTTGGGTTGGGGATTAGCCCTTGTCCATCTTGCAAAGCTGCAAATGGAAGCAGGGTTGTGGCTGCTATCAACAATGTGACATTTATTATGCCAACCATTGCCTTACTTCAAGCACATTATTTCAACATAAAAGGGGTGTTCACCACTGATTTCCCTGCCAATCCACCCCATTTGTTCAACTACTCAGGTCCTGGACCAGCCAATTTGAACACCGAAACTGGCACAAAGGTTTATCGGGTACCATTCAATGCCACAGTTCAGGTTGTGCTGCAAGATACTGGAATCATTGCACCTGAGAACCACCCAGTTCATCTTCATGGGTTCAATTTCTTTGTTGTTGGAAGAGGAGTAGGAAATTTCAACCCCAAAATTGACCCTAAGAACTTTAACCTTGTTGATCCTGTTGAAAGGAACACTATTGGAGTACCAGCTGGAGGGTGGACTGCATTTAGATTTAGAGCAGATAATCCAGGAGTTTGGTTCATGCACTGCCACTTGGAGGTACACACAACATGGGGGCTAAAGATGGCCTTTTTGGTGGACAATGGCAAAGGTCCAAAGCAATCAGTGATACCACCACCTAAAGATCTTCCCAAATGCTAA 1674 0.4403 MDSHWVRMVLLIACILPALVECRVRHYKFHVVSKQTNRLCSSKSIVTINGKFPGPTLYAREDDTVLVKVINQVNHNVTIHWHGVRQLRTGWADGPAYVTQCPIQPGQTYLYNFTLTGQRGTLLYHAHVNWLRSTLHGALVILPKRGVPYPFPKPDDELVVVLGEWWKSDTEAIINEALKSGLAPNVSDAHTINGLPGAVTNCSTQDVYNLPVESGKTYLLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKIETILIAPGQTTNVLLNADQKFGKYLVAASPFMDAPIAVDNLTATATLHYTGTLAATPTILTTPPPKNSTQIANNFISSLRGLNSKKYPVNVPLTVDHSLFFTVGLGISPCPSCKAANGSRVVAAINNVTFIMPTIALLQAHYFNIKGVFTTDFPANPPHLFNYSGPGPANLNTETGTKVYRVPFNATVQVVLQDTGIIAPENHPVHLHGFNFFVVGRGVGNFNPKIDPKNFNLVDPVERNTIGVPAGGWTAFRFRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPKQSVIPPPKDLPKC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00700 557 ProSitePatterns Multicopper oxidases signature 2. 520 531 IPR002355 GO:0005507
Gma03g00700 557 SUPERFAMILY Cupredoxins 347 557 IPR008972 -
Gma03g00700 557 Gene3D - 154 339 IPR008972 -
Gma03g00700 557 SUPERFAMILY Cupredoxins 151 319 IPR008972 -
Gma03g00700 557 CDD CuRO_3_LCC_plant 403 540 IPR034289 GO:0005507
Gma03g00700 557 CDD CuRO_2_LCC_plant 159 304 IPR034285 -
Gma03g00700 557 CDD CuRO_1_LCC_plant 27 143 IPR034288 GO:0005507
Gma03g00700 557 PANTHER LACCASE 7 557 - -
Gma03g00700 557 ProSitePatterns Multicopper oxidases signature 1. 515 535 IPR033138 -
Gma03g00700 557 PANTHER MULTI-COPPER OXIDASE 7 557 IPR045087 -
Gma03g00700 557 TIGRFAM laccase: laccase 22 557 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gma03g00700 557 Gene3D - 366 557 IPR008972 -
Gma03g00700 557 Gene3D - 22 146 IPR008972 -
Gma03g00700 557 Pfam Multicopper oxidase 408 540 IPR011706 GO:0005507|GO:0016491
Gma03g00700 557 SUPERFAMILY Cupredoxins 17 167 IPR008972 -
Gma03g00700 557 Pfam Multicopper oxidase 157 306 IPR001117 -
Gma03g00700 557 Pfam Multicopper oxidase 33 144 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00700 Gma-Chr3 22240922 22245334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00700 K05909 - gmx:100797234 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00700 03 22240922 22245334 Gma14g00528 14 5073169 5080739 ECH
Gma03g00700 03 22240922 22245334 Gma03g00700 03 22240922 22245334 ECH