Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00692 ATGATAGTTGCTATGGACTTGAATGCCTCGCCGGTTCCGGAGGAAGATGAAGATATTTTTGAGGAGAAGATACATGTTGAAGAGTTTCATGAACCTGAAGAACGCATAGAAACTGGAGCTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGAAGGTTGAAGAGAGAACGACCGGATGATAGACCTGTACATGTGTCACAGTCACATGCATACGATCAGTTATTTCATACCAAGAACCAAAGATCATATGATAAAAGCAGGCTTCCTCCAGGGTGGTTGGATTGCCCTTCATCTGGCCAGGAAATTTGTTGCATGATACCTTCTAAGGTTCCACTTGGTGAATCATTCAATGACTGCATTCCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAAAGAGTTTTAGGGAGAAAACTTGGTCTGGTGATTGATTTGACAAATACCACTCGATACTATCCTGTGTCAGATTTAAAAAAAGAGTGCATCAAACATGTTAAGATTCAATGCAGGGGGCGCAATTCTGTACCTGATAATTTATCTGTGAACCAGTTTGTCTATGAGGTTACACAATTTTTGTCACGTCAAAAGCACTCAAAAAAGTATATACTTGTTCATTGTACACATGGGCATAATCGTACAGGATACATGATCATCCACTATCTAATGCGTGCTATGTCAATGTCTGTTACTCAGGCAATAAAAATATTTTCTGAAGCTCGCACTCCAGGAATCTACAAACCTGATTACATTGATGCATTGTACACATTTTATCATGAGAAAAAACCTGAAATGGTAGTTTGTCCTCCTACTCCGGAGTGGAAGAGATCTTCTGAATTTGATCTCAATGGTGAAGCAGTTCCAGATGATGATGATGATGGAGTACCAGACCCTGATTTGCAGGAGAACCATGAGACAGACACACGAATGACAAATGATGATGTTTTAGGAGATGAGATACCTACTGATCAGCAAGATGCATTGCGTCAGTTCTGTTATCAAACGCTTAAATTGGGTGTTGGGGCCAGGGGACACACACAATTTCCAGGTTCACACCCAGTTTCTCTCAACAGGGATAATTTGCAATTGTTACGACAACGCTATTATTATGCAACATGGAAAGCAGATGGTACAAGATATATGATGCTAATAACAATGGATGGATGTTACTTGATTGATAGAAGTTTTAATTTTCGAAGGGTCCAAATGAGATTTCCTTGCAGAAGTACAAATGATGGTTTGGGCGAGAAGACCCACCACTTCACATTACTTGATGGTGAGATGGTTATTGATACATTGCCAGATTCACAGAAGCAGGAGAGAAGATACCTTATATATGATATGATGGCAATCAACCAAGTATCAATAATAGAGCGTCCCTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCACGAGCGACATAATATATATCAGAGCAGAAATCCTTACTATAGATATGACCTGGAACCGTTCAGGGCATGGATCTCTAACCTTAATTGGAGGAAAGACTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAAGGAATTCATTAAAAGACTCTCACATGAGGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATATACCACGTACCCATGAAGGACTCTTGAAGTGGAAATATGCTTATCTGAATTCAGTTGATTTTCTTTTCGAGGTAGTTGATGGTGATCGTGAGCTACTTTTTCTCAATGAGCGGGGAAAGAAGAAACTTTTGGAAGGGAATAGGGTTGAATTCACAGATGGTTCAGATCCCTCACTTTATTCTGGAAAGATAATTGAATGTTCTTGGGATTTTGACAAACTGGAATGGAAGTATATGCGAATCAGAACAGATAAATCAACTCCGAATGAGTTTAATACTTACAGGAAGGTGCTGCGAAGCATAAGAGACAACATCACCGAGGAAGATTTGTTGAATGAAATAAGTGAGATAATTCGCCTTCCCATGTATGCTGACCGGATCAGAATTGATAGTAAAGCGAATCAGCATGCTAATGTCGCAAGGCGAAGGCTGTCATCAGTGCCCGAATCAGATTGTTACTTAGCATGTTTGACGGTAGCCCAGTCACTGCTACTCATTCTACTAGTAGCTCTGGAAATCTACCATGGAAGGATGAGGAAGGTGGCAACTGTGTGA 2196 0.403 MIVAMDLNASPVPEEDEDIFEEKIHVEEFHEPEERIETGADIARREREERKRRLKRERPDDRPVHVSQSHAYDQLFHTKNQRSYDKSRLPPGWLDCPSSGQEICCMIPSKVPLGESFNDCIPPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKECIKHVKIQCRGRNSVPDNLSVNQFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAMSMSVTQAIKIFSEARTPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGVPDPDLQENHETDTRMTNDDVLGDEIPTDQQDALRQFCYQTLKLGVGARGHTQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRSTNDGLGEKTHHFTLLDGEMVIDTLPDSQKQERRYLIYDMMAINQVSIIERPFYERWKMLEKEVIEPRNHERHNIYQSRNPYYRYDLEPFRAWISNLNWRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDDPYIPRTHEGLLKWKYAYLNSVDFLFEVVDGDRELLFLNERGKKKLLEGNRVEFTDGSDPSLYSGKIIECSWDFDKLEWKYMRIRTDKSTPNEFNTYRKVLRSIRDNITEEDLLNEISEIIRLPMYADRIRIDSKANQHANVARRRLSSVPESDCYLACLTVAQSLLLILLVALEIYHGRMRKVATV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00692 731 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 278 IPR029021 -
Gma03g00692 731 MobiDBLite consensus disorder prediction 285 318 - -
Gma03g00692 731 MobiDBLite consensus disorder prediction 287 301 - -
Gma03g00692 731 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 186 255 IPR000387 GO:0016311|GO:0016791
Gma03g00692 731 PIRSF mRNA_capping_HCE 75 692 IPR017074 GO:0004484|GO:0006370|GO:0140818
Gma03g00692 731 SMART dsp_5 148 263 IPR020422 GO:0006470|GO:0008138
Gma03g00692 731 MobiDBLite consensus disorder prediction 302 318 - -
Gma03g00692 731 CDD RNA_5'-triphosphatase 92 258 - -
Gma03g00692 731 PANTHER MRNA-CAPPING ENZYME 3 690 - -
Gma03g00692 731 ProSitePatterns Tyrosine specific protein phosphatases active site. 208 218 IPR016130 GO:0016311|GO:0016791
Gma03g00692 731 Pfam mRNA capping enzyme, C-terminal domain 564 658 IPR013846 -
Gma03g00692 731 Pfam Dual specificity phosphatase, catalytic domain 141 261 IPR000340 GO:0008138|GO:0016311
Gma03g00692 731 Gene3D Protein tyrosine phosphatase superfamily 64 284 IPR029021 -
Gma03g00692 731 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 690 - -
Gma03g00692 731 Pfam mRNA capping enzyme, catalytic domain 355 559 IPR001339 GO:0004484|GO:0005524|GO:0006370
Gma03g00692 731 ProSiteProfiles Dual specificity protein phosphatase domain profile. 116 267 IPR020422 GO:0006470|GO:0008138
Gma03g00692 731 CDD Adenylation_mRNA_capping 326 560 IPR001339 GO:0004484|GO:0005524|GO:0006370
Gma03g00692 731 Gene3D DNA ligase/mRNA capping enzyme 314 559 - -
Gma03g00692 731 SUPERFAMILY Nucleic acid-binding proteins 563 674 IPR012340 -
Gma03g00692 731 MobiDBLite consensus disorder prediction 31 67 - -
Gma03g00692 731 MobiDBLite consensus disorder prediction 31 72 - -
Gma03g00692 731 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 560 - -
Gma03g00692 731 Gene3D - 595 667 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00692 Gma-Chr3 21859174 21871300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00692 1 690 Protein tyrosine phosphatase (PTP) family AT3G09100 67.626 0.0 935
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00692 K13917 - gmx:100806992 1361.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00692 03 21859174 21871300 Gma03g00692 03 21859174 21871300 ECH