Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00677 ATGGATTTTGATAAATTGGTAGGTAGTGCATCCCTCTATGCATTCCTTCAAATTGTTTTGGACAAGCTAGCTTCAACTGAGGTCGTCAATTTGATCCGTGGAGAGAAGAAGTTGCTTCAAAAGTTGAAGACCACTCTGATAAAGGTCAGTGCTGTGCTTGATGATGCTGAGAAGAAACAGATCACTGATGACAGCAGGGTCAAGGACTGGCTCAATGATCTCAAAGATGCTGTCTATAAAGCCGATGATTTGCTTGATGAACTTTCTACCAAAGCTGTCACTCAAAAGCAGGAGAATCTTGGTCTGAAAGAGGTTGAAATGGAGAAGAACTCGTATTGGCCAGATGAGAAAACTATACCAACAACATCTCTAGAAGCACGTCATATATACGGTAGGGATAAAGACAAGGAGGCCATAATAAATTTGTTGTTGGAGGATACTAGTGATGGTAAAGAAGTGGCTGTGATCCTTATTGTGGGCGTGGGTGGGGTTGGAAAAACTACTTTGGCCCAATCAGTGTACAATGATGACAACTTGTGCGACTGGTTTGATTTTAGAGCATGGGTTTGTGTTTCTGACAAATTTGATATTTTTAACATCACAAAATCTGTGATGGAGAATGTTACTGGAAAGCGTTGTGAAATAAATGATCTAAATTTACTTCAACTTGGTTTGATGGAAAAGCTGGCAGGTAAAAGATTCCTAATTGTTTTCGACGATGTCTGGACAGAGGATTGTTTTAGTTGGAGTCTTCTTACATATCAACATGGGGCTAGGGGAAGTAAAATTCTTGTAACAGCACGCAATGAGAATATAGCAACTATAATCGACACAGTTAAAGTTTATCGTCTAGACCAATTGTCAAATGAAGATTGTTGGTTTGTGTTTGCGGAACATGCATGTCTTTCCGTAGAATCCAATGAGGATACAACAGCACTAGAAAAAATTGGCTGGGAGATTGTAAAAAAGTGTAATGGATTGCCTTTGGCTGCGATATCACTTGGAGGTTTATTGAGAACAAAACATCACGTATGGGAATGGAATGATGTATTAAATAATGTCCTCTGGGGACTTTCTGAAAGTGTGTTTCCAGCATTGGAAATTAGTTATCATTATCTATCTCCACATTTAAAGCAGTGCTTTGTTTATTGTTCATTGTATCCTATAGATTATGAATTTTGGAAAGAGGAATTAATCTTGTTGTGGATGGCTGAGGGCCTTTTAAATCCCCAAAGAAATGGAAAGACTTTAGAAGAAACTGGTGACGACTATTTTGATGATTTGGTTTCAAGATCATTTTTTCAACCTTCTACAAGTTGGCCTCAACACAAATGTTTTGTGATGCACCAACTCATGCGTGATCTGGCAATATCCTTTGGTGGAGAATTCTATTTCAGATCAGAAGAACCTCGGGAAGAAATCAAGATTGGTGTCTACACTCGTCATTTGTCATTTACCAAATTTGGTGATATAGTCTTGGACAACTTTAAAACTTTTGACAAAGTAAAATTTTTGAGAACTTTCTTGCCGATCAATTTTAAAGATGCTCCATTCAACAATGAAAATGCGCCATGTATCATAATGTCAAAGCTCAAGTACCTGAGAGTTTTATCATTTTGTGGCTTCCAAAGTTTAAATGCTTTGCCTGGTGCAATAGGTAAATTGATCCATTTGCGTTATCTAAATCTCTCTTACACATGTATAGAAACACTGCCAGAGTCAGTGTGTAGTTTGTACAATCTACAAACTTTGAAGTTGTCTAATTGCAGAAAGTTGACTATGTTGCCTACTGGCATGCAAAATCTTGTAAACTTGCGTCATCTTAGTATTCATTGTACTTCTATAAAAGAGATGCCTAGAGGAATGGGAAAATTAAACAATTTACAGCATTTAGATTCCTTTATTGTAGGCCAGCATCAAGAGAATGGGATAAGAGAATTGGGAGGACTTTTAAATCTTCGCGGTCCACTTTCTATTATCCAGTTGGAAAATGTTACCAAAAGTGATGAAGCATTAAAGGCTAGGATAATGGATAAAAAGCACATTAACAGTTTATCCTTGGAATGGTCTGAACGTCACAACAATAGTCTTGACTTCCAAATTGAAGTAGATGTACTCTCCAAGTTACAACCTCACCAAGACCTGGTTTTCCTATCAATAAGTGGTTACAAAGGAACCAGATTTCCAGATTGGGTGGGAAATTTTTCCTACTACAATATGACACATCTAAGCTTATGTAACTGTAATGACTGTTGCATGCTTCCTTCACTTGGGCAACTGCCGTCTCTCAAGGACCTCTATATTTCATGTTTGAATTCGGTGAAGATTATTGGTGCAAGTTTATACAAAACAGAAGATTGTTCTTTTGTGAAACCTTTTTCCTCCCTTGAATCTCTAACCATTCATAACATGCCTTGTTGGGAGGCGTGGATTTCCTTTGATTTGGATGCTTTTCCTCTACTTAAGGATCTTGAAATAGGTCGTTGCCCCAATCTAAGGGGAGGTTTGCCAAATCACCTTCCTGCTCTGGAATCACTGACGATTAAAGATTGCAAGCTGCTTGTCTCTTCTCTTCCAACGGCTCCCGCTCTCCGAAGACTAAAGATACGTGGAAGCAAGAAAGTAAGGCTGCATGAAATTCCTATTTTGGTGGAATCTTTAGAGGTAGAAGGAAGCCCAATGGTAACGTCCATGATCGAGGCCATCTCTAATATTAAACCAAGTTGTCTACAATCTTTAACATTGTCAGATTGTTCATCAGCCATATCATTTTCAGGTGGTGGTTTACCTGCATCGCTGAAGAGTCTAAATATATGGGGTCTTAAGAAGTTGGAATTCCCGACGCAGCACAAACATGAATTGCTAGAATCACTTGAAATATATGACAGTTGTGATTCACTGATATCTCTTCCATTGATTATCTTTCCAAATCTCAAACGTTTGGTACTTGTGAAGTGTGAAAATATGGAATCTCTCTTGGTTTCTCTGTCAGAGTCATCTAACAATCTGAGTTATTTTGAGATTCGTGACTGTCCCAACTTTGTTTCATTCCCAAGAGAAGGATTGCCTGCTCCCAATTTGATTCGTTTCACAGTTGAAAATTGCGACAAGTTGAATTCGTTGCCTGAGCAGATGAGTACTCTTCTCCCAAAGTTACAATATCTTCACATAGACAACTGCTCGGAAATTGAGTCGTTTCCTGAAGGGGGTATGCCACCTAACTTGAGATTAGTAGGGATTGCCAATTGTGAGAAACTACTGAGAGGCATAGCATGGCCATCCATGGACATGCTTACCTCTCTCTACGTCCAGGGTCCATGTTATGGAATCAAGTCCTTCCCAAAGGAGGGTTTGCTGCCTCCCTCTCTTACATCTCTGCATCTATTTGACTTTTCAAGTCTGGAAACATTGGACTGCGAGGGGCTTATCCATCTCACATCCCTTCAAGAATTAGAAATTAATAGTTGTCAAAAGCTGGAGAACATGGCAGGAGAAAGGCTCCCTGCCTCTCTAATAAAATTAAGCATACATGAATGCCCTATGCTGCAAGAGCGATGCCACAAGAAGCACAAAGAAATTTGGCCTAAAATTTCCCATATTCATGGCATTGTTGTTGGCAGTAGGAAATGTTACTTATGGTCCTTTAGATTCAAAGAAATAACTACAGGAAATTGTAATATACTGCTCTTCCTTAAGGCATACTTGGCCGATTGGGATAGGGCTTTGTTCAAATTGACAAGGATGATCCCAACCTACTCTGGTTACATCTCCTATCGGACCTGTCACTCAGGAAACTATAAGTTACTATGCTCTGGAGCCCCTAATGTGTACAGGGAGTGA 3840 0.3922 MDFDKLVGSASLYAFLQIVLDKLASTEVVNLIRGEKKLLQKLKTTLIKVSAVLDDAEKKQITDDSRVKDWLNDLKDAVYKADDLLDELSTKAVTQKQENLGLKEVEMEKNSYWPDEKTIPTTSLEARHIYGRDKDKEAIINLLLEDTSDGKEVAVILIVGVGGVGKTTLAQSVYNDDNLCDWFDFRAWVCVSDKFDIFNITKSVMENVTGKRCEINDLNLLQLGLMEKLAGKRFLIVFDDVWTEDCFSWSLLTYQHGARGSKILVTARNENIATIIDTVKVYRLDQLSNEDCWFVFAEHACLSVESNEDTTALEKIGWEIVKKCNGLPLAAISLGGLLRTKHHVWEWNDVLNNVLWGLSESVFPALEISYHYLSPHLKQCFVYCSLYPIDYEFWKEELILLWMAEGLLNPQRNGKTLEETGDDYFDDLVSRSFFQPSTSWPQHKCFVMHQLMRDLAISFGGEFYFRSEEPREEIKIGVYTRHLSFTKFGDIVLDNFKTFDKVKFLRTFLPINFKDAPFNNENAPCIIMSKLKYLRVLSFCGFQSLNALPGAIGKLIHLRYLNLSYTCIETLPESVCSLYNLQTLKLSNCRKLTMLPTGMQNLVNLRHLSIHCTSIKEMPRGMGKLNNLQHLDSFIVGQHQENGIRELGGLLNLRGPLSIIQLENVTKSDEALKARIMDKKHINSLSLEWSERHNNSLDFQIEVDVLSKLQPHQDLVFLSISGYKGTRFPDWVGNFSYYNMTHLSLCNCNDCCMLPSLGQLPSLKDLYISCLNSVKIIGASLYKTEDCSFVKPFSSLESLTIHNMPCWEAWISFDLDAFPLLKDLEIGRCPNLRGGLPNHLPALESLTIKDCKLLVSSLPTAPALRRLKIRGSKKVRLHEIPILVESLEVEGSPMVTSMIEAISNIKPSCLQSLTLSDCSSAISFSGGGLPASLKSLNIWGLKKLEFPTQHKHELLESLEIYDSCDSLISLPLIIFPNLKRLVLVKCENMESLLVSLSESSNNLSYFEIRDCPNFVSFPREGLPAPNLIRFTVENCDKLNSLPEQMSTLLPKLQYLHIDNCSEIESFPEGGMPPNLRLVGIANCEKLLRGIAWPSMDMLTSLYVQGPCYGIKSFPKEGLLPPSLTSLHLFDFSSLETLDCEGLIHLTSLQELEINSCQKLENMAGERLPASLIKLSIHECPMLQERCHKKHKEIWPKISHIHGIVVGSRKCYLWSFRFKEITTGNCNILLFLKAYLADWDRALFKLTRMIPTYSGYISYRTCHSGNYKLLCSGAPNVYRE 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00677 1279 Pfam NB-ARC domain 133 354 IPR002182 GO:0043531
Gma03g00677 1279 SUPERFAMILY L domain-like 862 1198 - -
Gma03g00677 1279 Pfam Rx N-terminal domain 15 98 IPR041118 -
Gma03g00677 1279 Gene3D - 16 111 - -
Gma03g00677 1279 Gene3D - 115 281 IPR027417 -
Gma03g00677 1279 Gene3D Ribonuclease Inhibitor 892 1021 IPR032675 -
Gma03g00677 1279 Gene3D Ribonuclease Inhibitor 1022 1197 IPR032675 -
Gma03g00677 1279 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 44 999 - -
Gma03g00677 1279 Gene3D Ribonuclease Inhibitor 497 891 IPR032675 -
Gma03g00677 1279 CDD AAA 130 243 - -
Gma03g00677 1279 SMART LRR_typ_2 602 625 IPR003591 -
Gma03g00677 1279 SMART LRR_typ_2 555 578 IPR003591 -
Gma03g00677 1279 Coils Coil 39 59 - -
Gma03g00677 1279 SUPERFAMILY L domain-like 518 918 - -
Gma03g00677 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 384 IPR027417 -
Gma03g00677 1279 CDD RX-CC_like 13 103 IPR038005 -
Gma03g00677 1279 Gene3D - 364 458 IPR036388 -
Gma03g00677 1279 PRINTS Disease resistance protein signature 228 242 - -
Gma03g00677 1279 PRINTS Disease resistance protein signature 155 170 - -
Gma03g00677 1279 PRINTS Disease resistance protein signature 324 338 - -
Gma03g00677 1279 PRINTS Disease resistance protein signature 576 592 - -
Gma03g00677 1279 PANTHER DISEASE RESISTANCE PROTEIN RP 44 999 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00677 Gma-Chr3 21453159 21460174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00677 152 619 WRKY Transcription Factor Family AT5G45050 20.866 5.20e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00677 - - gmx:100499652 2405.94