Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00662 ATGGTGAAGAAGAGAAAGGAGAAAGAGCAAATCCCATTTGGGGTTGACAAAGATGAAACATTCACAGCTCTATCATCACATGCAAGAGTGGATTGGAAGGAGACACCAGAAGGGCATGTCATAATGCTAGATGTGCCAGGGTTGAAGAGAGATGAGATCAAGATAGAAGTGGAAGGGAATAGAGTGCTGAGAGTGAGTGGAGAAAGGAAGAGGGAAGAGGAGAAGGAAGGGGATCACTGGCATAGAGTGGAGAGATCCTATGGCAAATTCTGGAGGCATTTCAAGGTGCCAGACAATGTGGACTCTCAAGGCAACTACTTGCATGACAAGGGTAGCAGTGTCTTGAATTCGTGGAAAATAAGGATCAGAATTGCTTTGGATGCCTCTCGAGGAATACAATATCTTCATAATTATGCAGATTCATTTATTATTCACGGAGATATCAAGTCTTCCAACATTCTTCTTGATGCCAGCTGGACGGCAAGAGTATCTGATTTTGGATGGAAGTTTATGAGAAACAGACAACGTATAATTGAGAACACTGATCCTGAGTACGTTATTCGAGGTGCATTGTCAGCAGAGAGTGATGTGCATGGGCTTGGAGTTGTACTGTTTGAACTTCTAACAGGAAAGAGACCTACATTCATGTACGGGGAAGATGGAGGCACCCTATTAAGTAGAAAACATTTGGTAGACTTTGCTGTGACTGCTATTTCAAATGGATTTTTGGAGAAATTTTTGGATCAAAGGGCTGGACAACCCGATGTGAATGAAGCAGAAGCAGTAAAGTTAGTGGCTGATACCGCTATCCGTTGTGTGAATTTGAAACTAAAAGATAGACCAACCATGGCTGACATTGTAGTCAGATTAGAGCGGGCTTTGGCTATTTGTGATTATGATAGCATTTTCAGGGCTTTGGTTTCGAATTGTTAA 933 0.4223 MVKKRKEKEQIPFGVDKDETFTALSSHARVDWKETPEGHVIMLDVPGLKRDEIKIEVEGNRVLRVSGERKREEEKEGDHWHRVERSYGKFWRHFKVPDNVDSQGNYLHDKGSSVLNSWKIRIRIALDASRGIQYLHNYADSFIIHGDIKSSNILLDASWTARVSDFGWKFMRNRQRIIENTDPEYVIRGALSAESDVHGLGVVLFELLTGKRPTFMYGEDGGTLLSRKHLVDFAVTAISNGFLEKFLDQRAGQPDVNEAEAVKLVADTAIRCVNLKLKDRPTMADIVVRLERALAICDYDSIFRALVSNC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00662 310 Pfam Hsp20/alpha crystallin family 31 102 IPR002068 -
Gma03g00662 310 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 21 141 IPR002068 -
Gma03g00662 310 ProSiteProfiles Protein kinase domain profile. 1 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00662 310 SUPERFAMILY HSP20-like chaperones 22 102 IPR008978 -
Gma03g00662 310 Gene3D - 4 105 IPR008978 -
Gma03g00662 310 SMART serkin_6 52 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g00662 310 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 107 301 - -
Gma03g00662 310 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 107 301 IPR044815 GO:0004674
Gma03g00662 310 Pfam Protein tyrosine and serine/threonine kinase 105 290 IPR001245 GO:0004672|GO:0006468
Gma03g00662 310 Gene3D Transferase(Phosphotransferase) domain 1 106 301 - -
Gma03g00662 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gma03g00662 310 SUPERFAMILY Protein kinase-like (PK-like) 105 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00662 Gma-Chr3 21156027 21160574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00662 105 308 Receptor kinase-like Gene Family AT3G55950 49.565 3.50e-48 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma03g00662 PK_Tyr_Ser-Thr 1.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00662 - - gmx:121173070 409.453