Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00632 ATGGCTGCAAATGAAGATGCTGTACAGGAATTTACACCAAAGAAGAAGCCACCTTCAGAGGATGAGAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTAATGAAAGCTTTGATGAGGCCTGGTGGGGGTGATGCTGGACCTTCTGATGGTGACCAGATTATCTATCACTGCACAATTCGGACTTTGGATGGAGTACTTGTGGAATCTACCAGATCAGATTATGGAGGCAAGGGCATCCCAATAAGACATGTTTTGGGCAAAAGCAAGATGTTATTGGGATTGCTAGAAGGAATTCCATCAATGTTGAAAGGCGAAGTGGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGTGAGGATGATTGTCCTGTTTCTGCTCCTGATGGTTTTCCTAAGGATGATGAACTTCATTTTGAAATTGAGCTGATAGAATTTTTCAAAGCCAAGGTTGTTACTGATGATTTGGGAGTTGTGAAAAAGGTAGAATGTGAAGGGCAGGGCTGGGAATCTCCAAGAGAACCTTATGAAGTGAAGGCTTTGATTTCAGCAAAGACAGTTACTGGGAAATTGATAATGTCACATATGGAAGGAGAACCATACTTCTTTACTTTTGGAAAATCAGAGGTACCTAAAGGCCTTGAAATGGCGATAGGAACAATGGTTCGGGAAGAGAAGGCTGTTATATATGTCACCAGTCAGTATTTGACTGAGTCTCCTCTGATGCCTGTAATAGAAGGTTACGATGAAGTCCATTTTGAAGTGGAGCTGGTTCACTTTATTCAGGTGAGAGACATGCTTGGAGATGGGCGCCTAATAAAACGCCGAATTCGTGATGGGAAAGGTGATTTTCCAATGGATTGTCCCCTTCATGACAGTCTGCTTCGCGTTCATTACAAGGGTACTGTTCTCAATGAAGAAAAGAGGGTATTCTATGATACAAGGGTAGACAATGATGGTCAGCCATTGGAGTTCTGTTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAAATGAGTGTTCGTTTGATGCTTCCTGGAGAGATAGCTCTTGTCACATGCCCTCCTGACTATGCTTATGATAAGTTTCCGAGGCCATTAAATGTCCCTGAGGGTGCTCATATTCAGTGGGAAATTGAGCTTCTAGGTTTTGAAACGCCAAAGGACTGGACTGGATTGGACTTTAAAAGTATAATGAATGAAGCTGAAAACATCAGAAATACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGATGACGAAGAAGGAAAAGTTTTTGCTGACACACGCAATTTGCTGCACCTGAATGTTGCTGCATGCCATCTAAAATTGGGAGAATGCAAAAAGTCCATTGAGACTTGCAATAAGGTTTTGGAAGCAAATCCTGCACATGTCAAGGGTCTTTATCGTCGTGGAATGGCCTACATGGCTGCTGGAGATTTTGAAGAAGCGAGGGCTGATTTCAAAGTGATGATGAAAGTCGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCAAAAACTGAAGCAGAAGGAACAGGATGTTGAGAAGAAAGCTAGGAAACAATTTAAAGGGCTATTTGACAAGAAGCCGGGAGAGATTTCAGAAGCTAAAGCTGATGTAGATGGAGATCAGATCACAAGTGAAAGCCAGAAGGACGATGAAGTACATGGGGACTCTGATGGAACAAATTCAGAGGACTCACATGAAGCTCCACCTGAGGCACAACGAACGGGTTGGTTCTCACTCTTTTGGCCTTCTGGCAGAAGACTTTTTGAATCTCTTGGGATTAATAGATGTACCATACTTTAA 1869 0.4243 MAANEDAVQEFTPKKKPPSEDEKRKKKIVPGSLMKALMRPGGGDAGPSDGDQIIYHCTIRTLDGVLVESTRSDYGGKGIPIRHVLGKSKMLLGLLEGIPSMLKGEVAMFKMKPQLHYGEDDCPVSAPDGFPKDDELHFEIELIEFFKAKVVTDDLGVVKKVECEGQGWESPREPYEVKALISAKTVTGKLIMSHMEGEPYFFTFGKSEVPKGLEMAIGTMVREEKAVIYVTSQYLTESPLMPVIEGYDEVHFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGTVLNEEKRVFYDTRVDNDGQPLEFCSGEGLVPEGFEMSVRLMLPGEIALVTCPPDYAYDKFPRPLNVPEGAHIQWEIELLGFETPKDWTGLDFKSIMNEAENIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFADTRNLLHLNVAACHLKLGECKKSIETCNKVLEANPAHVKGLYRRGMAYMAAGDFEEARADFKVMMKVDKSTESDATAALQKLKQKEQDVEKKARKQFKGLFDKKPGEISEAKADVDGDQITSESQKDDEVHGDSDGTNSEDSHEAPPEAQRTGWFSLFWPSGRRLFESLGINRCTIL 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00632 622 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 146 IPR001179 GO:0003755
Gma03g00632 622 Gene3D Tetratricopeptide repeat domain 394 548 IPR011990 GO:0005515
Gma03g00632 622 Coils Coil 517 540 - -
Gma03g00632 622 Gene3D - 150 260 IPR046357 GO:0003755
Gma03g00632 622 ProSiteProfiles TPR repeat profile. 483 516 IPR019734 GO:0005515
Gma03g00632 622 MobiDBLite consensus disorder prediction 553 592 - -
Gma03g00632 622 SUPERFAMILY FKBP-like 25 149 - -
Gma03g00632 622 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 69 567 IPR031135 GO:0030154|GO:0042761|GO:0099402
Gma03g00632 622 SUPERFAMILY FKBP-like 265 389 - -
Gma03g00632 622 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 291 383 IPR001179 GO:0003755
Gma03g00632 622 MobiDBLite consensus disorder prediction 9 27 - -
Gma03g00632 622 Pfam Tetratricopeptide repeat 484 507 IPR019734 GO:0005515
Gma03g00632 622 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 69 567 - -
Gma03g00632 622 SMART tpr_5 449 482 IPR019734 GO:0005515
Gma03g00632 622 SMART tpr_5 400 433 IPR019734 GO:0005515
Gma03g00632 622 SMART tpr_5 483 516 IPR019734 GO:0005515
Gma03g00632 622 SUPERFAMILY FKBP-like 151 259 - -
Gma03g00632 622 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 174 260 IPR001179 GO:0003755
Gma03g00632 622 MobiDBLite consensus disorder prediction 1 27 - -
Gma03g00632 622 MobiDBLite consensus disorder prediction 553 598 - -
Gma03g00632 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 380 IPR001179 GO:0003755
Gma03g00632 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 176 257 IPR001179 GO:0003755
Gma03g00632 622 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 143 IPR001179 GO:0003755
Gma03g00632 622 Gene3D - 261 386 IPR046357 GO:0003755
Gma03g00632 622 Gene3D - 1 149 IPR046357 GO:0003755
Gma03g00632 622 SUPERFAMILY TPR-like 397 540 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00632 Gma-Chr3 19583704 19596422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00632 47 548 Calmodulin-binding Proteins AT5G48570 30.078 1.02e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00632 - - gmx:100818201 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g00632 03 19583704 19596422 Gma03g00632 03 19583704 19596422 ECH