Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00619 ATGGGGCTTACCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTCAAGGGATCATGACCGGGTCGATAGTGATTTCCAAAGGAACAAAGTACCTACCTACCTACCTAATCACATTAATGGATTTGATGAATCCAATATTGGAGAAAGGGCATAGCAGAGTTCCTGTCTATTATGAGCAGCCTACAAATATTATTGGACTTGTTCTGGTTAAGAATTTATTGACAATTGACCCAGAAGAAGAAATACCCGTGAAAAATGTGACCATCCAAAGAATTCCAAGGGTTCCAGAAACGTTGCCACTTTATGATATTTTGAATGAGTTCCAGAAAGGCCATAGCCACATGGCTGTTGTTGTCAGACATTGTGAGAAGACAGGGCAACAATCTTCCAACAATAATGCCGATGTGAGAGATGTAAAGGTAGATATTGATGGTGGTGAGAGAACTGGAACGGAAGCTCTGAGGGAGGAGCAAACGGCTGCATTGGATAGAATTGAAGCAGAATATAGGGAGCAGTTGGCAGGGCTGAGAAGAGATGCTGAAAGCAAGGAGCAAAAGTTGGCTGAACAATGGGCTGCAAAACACTTGCGACTTACTAAGTTTGTAGAACAAGCTGTGGTGAACGAAGATTCTACTGGGGATGTAATTGCTTTAAAACATCAAATTCGACTTTTGAAGGTGGTATCAGTTATTTCTTGTAGTATAAGTTTTATGCTATATTTTTATTTTGCAAACACAAGTTACATCAAGGACAGGTTGCGTGAATATGAAGTTGATGTTGATCGTTCTAAAAGACGTGGACCTGAGGTTGAAAGAATTTATTTTGTGATTCTAGAGATGGCACCTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCAAGTCCAGAAGTTCTGCTTACCTTGTCTAGATCGGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAACATGTTCAAAGCTTGAAAGGAGCATCTAACAGTCCACAAGCACCATTCTCTTCAGTAGAGAACAAACCAAGTTTGTTTGCACGATTATCAAAAGAGAGAGTGGAGAAGCTTTCAATTACCGACTTGGAGTCTGGGGCAGGGAAGGACATAGAAAGTGCTTATTGGGAATTGGTTGTGAAGGACATACAGGATACTTGCAAACTTCTGGAGCCAATTTACAATGAAACAGATGGGGAAGATGGACATGTATCTCTTGCAGTTTCCCCAAAGCTAGCAAATGACACCAAGGGGACAATTGAGGCAGCAAAATGGCTTCATAATATGGTTGGAAGTCCCAATAGGCTCATAGTTTGCGTATTTGAACAACTCATATTCTACCTCCCTAAATATGAAGCAGTGATTGATGCTTACTTGGATGGCCTTGAGTCTTGTGGCATGACTGATCTCTCTAAGGTTTCAAGTGCAGCAGCATTCTACATCAGTAGAATGGATGTTACACTTGACAAGAAACTTGAGCAAATTGGTACTACTGAGGCTCTTGATCTCAAAGGAAAGGGTGCGGTTGCTCAAGCAGTCTTAGCATACCAACTTTACCAGAAAAAAATTTCTGGTCCAAGATGGGAACGCTTGGAGAATAGAGGTGCCAAGAAGCAGAGGTTGATGTGGGCTTCAACAAATGTGAAAAATCCATCTTACCCTGACACGTTTTATGTTAATTCTGTTATTGGACGAGATACAATTTCAACCTTTTCAGTACAAGCTCTTCAAGCATTCATGGACCATCGTATTCTTTCAAGAACGCTTGATGCAAAAGTATCAGAGGCTCAAGACATTTACAATGCAATTGAGAAGTTGGGGATTGATTGGAGTTCTGTTGGATCAGAACTGGAACATGAGGTGCTGGATTCTTTCACAAAAAGCTTTGACAATGTGCTTGAATGCATGCAAAAGAAGGCTATGAACATATATTCATTTCAAAAGCACGTTTAA 2049 0.407 MGLTNWYGLIPELFPNVKYVQGIMTGSIVISKGTKYLPTYLITLMDLMNPILEKGHSRVPVYYEQPTNIIGLVLVKNLLTIDPEEEIPVKNVTIQRIPRVPETLPLYDILNEFQKGHSHMAVVVRHCEKTGQQSSNNNADVRDVKVDIDGGERTGTEALREEQTAALDRIEAEYREQLAGLRRDAESKEQKLAEQWAAKHLRLTKFVEQAVVNEDSTGDVIALKHQIRLLKVVSVISCSISFMLYFYFANTSYIKDRLREYEVDVDRSKRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKGASNSPQAPFSSVENKPSLFARLSKERVEKLSITDLESGAGKDIESAYWELVVKDIQDTCKLLEPIYNETDGEDGHVSLAVSPKLANDTKGTIEAAKWLHNMVGSPNRLIVCVFEQLIFYLPKYEAVIDAYLDGLESCGMTDLSKVSSAAAFYISRMDVTLDKKLEQIGTTEALDLKGKGAVAQAVLAYQLYQKKISGPRWERLENRGAKKQRLMWASTNVKNPSYPDTFYVNSVIGRDTISTFSVQALQAFMDHRILSRTLDAKVSEAQDIYNAIEKLGIDWSSVGSELEHEVLDSFTKSFDNVLECMQKKAMNIYSFQKHV 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00619 682 SUPERFAMILY Aldolase 376 671 - -
Gma03g00619 682 Pfam Transaldolase/Fructose-6-phosphate aldolase 375 469 IPR001585 GO:0005975
Gma03g00619 682 Pfam Transaldolase/Fructose-6-phosphate aldolase 476 666 IPR001585 GO:0005975
Gma03g00619 682 SUPERFAMILY CBS-domain pair 20 126 IPR046342 -
Gma03g00619 682 Pfam STAS domain 246 347 IPR002645 -
Gma03g00619 682 Coils Coil 171 191 - -
Gma03g00619 682 CDD STAS_SulP_like_sulfate_transporter 246 344 - -
Gma03g00619 682 PANTHER TRANSALDOLASE 371 677 IPR001585 GO:0005975
Gma03g00619 682 ProSiteProfiles STAS domain profile. 246 351 IPR002645 -
Gma03g00619 682 PANTHER TRANSALDOLASE-RELATED 371 677 - -
Gma03g00619 682 CDD CBS_pair_CorC_HlyC_assoc 43 124 IPR044751 -
Gma03g00619 682 Gene3D STAS domain 238 356 IPR036513 -
Gma03g00619 682 SUPERFAMILY SpoIIaa-like 246 351 IPR036513 -
Gma03g00619 682 Hamap Transaldolase [tal]. 391 678 IPR004732 GO:0004801|GO:0005737|GO:0006098
Gma03g00619 682 Gene3D - 27 141 IPR046342 -
Gma03g00619 682 Gene3D Aldolase class I 357 471 IPR013785 -
Gma03g00619 682 Gene3D Aldolase class I 475 672 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00619 Gma-Chr3 19084453 19093522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00619 247 357 Inorganic Solute Cotransporters AT5G13550 77.477 9.31e-50 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00619 K00616 - gmx:106795612 530.791