Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00597 ATGTTGAGCCGCGCGGCGAATGGTGAAGTGGCTGGTTCTGGTTATAGTGGTGAGGATGAGATGTACGAGCCGCTGTGGAAGGGTTGCGCGGGACCACTGGTGGATGTTCCTCGTGTTGGCCAGAGAGTCTTCTATTTTCCACAAGGCCACATGGAGCAATTAGAGGCTTCAACAAACCAGGAACTGAATCAGAGGATTCCTTTGCTGAAGCTTCCCACGAAGATCCTTTGTCGAGTTGTGAACGTTCATTTGCTGGCTGAGCAAGAAACGGATGAGGTTTACGCACAGATCACTTTGGTGCCGGAATCTAATCAAGATGAGCCGATGAACCCTGACCCGTGCACTGCTGAACCTCCAAGAGCACCAGTTCACTCGTTCAGCAAGGTCTTGACAGCTTCAGATACCAGCACCCATGGTGGCTTCTCTGTTCTCAGGAAACATGCCATGGAATGCCTTCCTGCGTTGGACATGTCACAACCAACACCAACTCAGGAATTGGTTGCAAAGGATCTTCATGGTTACGAATGGCGCTTTAAACATATATTTAGAGgtcagccgcgcaggcacttgctcacgactggctggagtacttttgtgacctccaagagattagttgctggagatacctttgtgtttttgagAGGGGACAATGGGGAATTACGCGTGGGCGTAAGACGTCTAGCTCGCCAAGCAAGTAGCATGCCTTCATCAGTGATTTCTAGTCAGAGCATGCACTTGGGAGTTCTTGCAACCGCCTCTCATGCTGTTGCAACTCAGACTCTTTTCGTAGTATATTACAAGCCAAGGACGAGCCAGTTCATCATCAGCGTGAACAAGTATTTGGAGGCTATGAACAGGTTTAGTGTTGGCATGAGGCTCAAGATGAGATTTGAGGGGGATGATTCTGCTGAGACTGACAAAAGATTTTCGGGTACCATAGTTGGAGTGGAAGATATTTCTCCTCATTGGGTAAATTCAAAATGGCGATCACTCAAGGTATTCTCATCTTTCACTTTGAAGTTGTTCCTTTTATTTTTGGTGATCATATGTTTCTCATATTTTGTGAATCTCCAGGTTCAGTGGGATGAACCTGCAGCTGTTCCCCGACCTGATAGGGTTTCACCATGGGAGATTGAACCCTTCGTTGCTTCTGCTTCTACGCCCTCAGTTCAACCTACTATGGTAAAGACTAAAAGGCCACGACCACCCAGCGAAACTCCAGATGTTGACACAACATCTGCTGCTTCTGTTTTCTGGGATGCTGGTCTTCAACAGGCTGACATGGCACAAAAAAATGTTTTGGCAGAAAGCAAACGGAATGACAGTACTGGTACATGGCATCATATGCAAACTGACATGAATAGTAAAAGCAACAGCGGCAATGCTATGTTAAGGAATCAGACAGAAGGAAGTTGGCTATCTTCTCCGCATTCTAGTTGTCCGTCTCATTTGTTTCAGGACGCAACAGATGATAGCAAGAGTGTCTCAGCCTGGCCTGTTTCAAAGCCTCACTCATCCAGATTGAACAATGATCACGTGCTTGACCAAGTTGACAAGGAGAGCAAAGTTGAGACTGCTACAAGTTATCGGTTGTTTGGAATTGATCTTATTGATCATTCTAGGAACTCTCCTTCAGTAGAGAAGGCATCTGCACAAGCAGGAAATGCACCCAAAGTTACTACTGAAGGCTGCACCAGTACCTTGACCCGAACTGATGCTGGCCATCTGTCGGATGTACCAATGGCTTCTTCCAAGGAGAGGAAACAAGAACAGCAGCAAGTATCACCAAAAGAGACTCAGAGCAAGCAAATTTGTAGAAGTCGAACCAAGGTTCAAATGCAAGGTGTTGCAGTGGGTCGTGCTGTCGATTTGACCATGTTGGATGGATATGATCAACTTATAAATGAATTGGAGGAGATGTTTGACATAAAGGGACAACTTCAACACCGGAATAAGTGGGAAATTGTCTTCACTGACGATGAAGGTGACATGATGCTTGTTGGAGATGATCCATGGCCTGAATTCTGTAATATGGTGAGAAGAATCTTCATTTGTTCCAGCCAGGATGTGAAGAAGATGAGTTGTGGAAGCAAACTGCCGATCTCCTCAGTGGAAGACGGGACTCAGCACCCAAATGCTGATCCTTCTTGTTGCTTCAAATTGTTTGTGGGAAGGAAGTTGGTCTATTTGGGCTGGGGGTGGTGGCACCCCTCAAAATTCAACAACAGTAAAAATGTCATGTTACCACTCAAATCTCCGTAG 2262 0.4416 MLSRAANGEVAGSGYSGEDEMYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQDEPMNPDPCTAEPPRAPVHSFSKVLTASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISVNKYLEAMNRFSVGMRLKMRFEGDDSAETDKRFSGTIVGVEDISPHWVNSKWRSLKVFSSFTLKLFLLFLVIICFSYFVNLQVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKRPRPPSETPDVDTTSAASVFWDAGLQQADMAQKNVLAESKRNDSTGTWHHMQTDMNSKSNSGNAMLRNQTEGSWLSSPHSSCPSHLFQDATDDSKSVSAWPVSKPHSSRLNNDHVLDQVDKESKVETATSYRLFGIDLIDHSRNSPSVEKASAQAGNAPKVTTEGCTSTLTRTDAGHLSDVPMASSKERKQEQQQVSPKETQSKQICRSRTKVQMQGVAVGRAVDLTMLDGYDQLINELEEMFDIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSCGSKLPISSVEDGTQHPNADPSCCFKLFVGRKLVYLGWGWWHPSKFNNSKNVMLPLKSP 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00597 753 Gene3D - 123 227 IPR015300 -
Gma03g00597 753 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 353 706 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma03g00597 753 MobiDBLite consensus disorder prediction 387 411 - -
Gma03g00597 753 Gene3D - 601 694 - -
Gma03g00597 753 MobiDBLite consensus disorder prediction 436 463 - -
Gma03g00597 753 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 333 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma03g00597 753 Gene3D - 350 387 - -
Gma03g00597 753 Gene3D - 286 336 - -
Gma03g00597 753 PANTHER AUXIN RESPONSE FACTOR 16 333 - -
Gma03g00597 753 SMART B3_2 126 228 IPR003340 GO:0003677
Gma03g00597 753 Pfam Auxin response factor 252 332 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma03g00597 753 MobiDBLite consensus disorder prediction 543 573 - -
Gma03g00597 753 ProSiteProfiles PB1 domain profile. 606 687 IPR000270 GO:0005515
Gma03g00597 753 Pfam B3 DNA binding domain 126 226 IPR003340 GO:0003677
Gma03g00597 753 PANTHER AUXIN RESPONSE FACTOR 353 706 - -
Gma03g00597 753 MobiDBLite consensus disorder prediction 468 487 - -
Gma03g00597 753 SUPERFAMILY CAD & PB1 domains 608 682 - -
Gma03g00597 753 Pfam AUX/IAA family 584 642 IPR033389 -
Gma03g00597 753 Pfam AUX/IAA family 649 690 IPR033389 -
Gma03g00597 753 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Gma03g00597 753 SUPERFAMILY DNA-binding pseudobarrel domain 117 255 IPR015300 -
Gma03g00597 753 MobiDBLite consensus disorder prediction 543 606 - -
Gma03g00597 753 CDD B3_DNA 124 226 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00597 Gma-Chr3 18176043 18180443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00597 17 699 B3 DNA Binding Superfamily AT4G23980 56.566 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma03g00597 B3 7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00597 K14486 - gmx:100779003 1352.04