Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g00576 ATGTGGTGTGCACGACATGTAGATAGCCACGTGACACTCGGTGACCTCACTCGCGTTACTATGGACCTCACTCGCATTTCAAACCTCACCGAGGACCTAGCTTTTTCACTCAGTTGCCCTACACAACTTTCATCACTGCTTCAGTCACCTCTTCGTTTTGGTTTCTTTATCTCTTTCTCTTGGGTGGATTTATGTGGATTTGATCCTGGATTTAGGATAGTTGAAGTTGTTTGCTGCAAGTTGACTCCACTACAATCAAACCTATATAAACATTTTATACAATCCAAAAATGTTAAGCGGGCAATTACTGAAGAACTGAAGCAATCAAAGATTTTGGCCTACATAACAACTCTCAAAAAGTTATGCAATCATCCAAAGCTAAATTTCGGAAAAGTTATTGCTGTTGGCCCTGGCTTTCACAGTGAGAATGGGAAGCTAATTCCTATGGCTGTTAAGGAAGGTGATACTGTTCTTTTGCCTGAATATGGGGGAACTGAGGTGAAGCTTGATAACAAAGAATACTGGAAGGACTTCTTGAACTACTAG 546 0.4103 MWCARHVDSHVTLGDLTRVTMDLTRISNLTEDLAFSLSCPTQLSSLLQSPLRFGFFISFSWVDLCGFDPGFRIVEVVCCKLTPLQSNLYKHFIQSKNVKRAITEELKQSKILAYITTLKKLCNHPKLNFGKVIAVGPGFHSENGKLIPMAVKEGDTVLLPEYGGTEVKLDNKEYWKDFLNY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g00576 181 SUPERFAMILY GroES-like 125 175 IPR011032 -
Gma03g00576 181 CDD cpn10 98 174 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g00576 181 Pfam Chaperonin 10 Kd subunit 125 174 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g00576 181 PANTHER 10 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 98 175 - -
Gma03g00576 181 PANTHER 10 KDA HEAT SHOCK PROTEIN 98 175 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g00576 181 Gene3D - 82 174 - -
Gma03g00576 181 SMART Cpn10_2 98 174 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g00576 181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g00576 Gma-Chr3 16440156 16447888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g00576 126 181 Calmodulin-binding Proteins AT5G20720 44.643 1.77e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g00576 K10875 - gmx:106798298 181.415